Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 SLC7A5P1-201ENST00000568957 537 ntBASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NUCKS1Q9H1E3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 AC112907.3-201ENST00000577781 2400 ntBASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 TCF3P1-201ENST00000423021 1937 ntBASIC21.98■■□□□ 1.11
NUCKS1Q9H1E3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 AC137761.2-201ENST00000561729 223 ntBASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 AC145350.3-201ENST00000569033 163 ntBASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUCKS1Q9H1E3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 AL137784.2-201ENST00000607332 1000 ntBASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUCKS1Q9H1E3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.95■■□□□ 1.11
NUCKS1Q9H1E3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
NUCKS1Q9H1E3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
NUCKS1Q9H1E3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
NUCKS1Q9H1E3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 AC004911.1-201ENST00000416316 871 ntBASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 AC091799.1-201ENST00000422823 811 ntBASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 PCDHAC2-203ENST00000615316 3011 ntBASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NUCKS1Q9H1E3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms