Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS2Q99743 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS2Q99743 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NPAS2Q99743 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.83■□□□□ 0.77
NPAS2Q99743 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.83■□□□□ 0.77
NPAS2Q99743 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
NPAS2Q99743 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPAS2Q99743 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS2Q99743 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NPAS2Q99743 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS2Q99743 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NPAS2Q99743 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.82■□□□□ 0.76
NPAS2Q99743 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS2Q99743 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS2Q99743 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS2Q99743 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS2Q99743 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS2Q99743 KRT19P1-201ENST00000405746 1186 ntBASIC19.82■□□□□ 0.76
NPAS2Q99743 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS2Q99743 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NPAS2Q99743 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.82■□□□□ 0.76
NPAS2Q99743 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS2Q99743 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NPAS2Q99743 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
NPAS2Q99743 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 KRT87P-202ENST00000534226 1464 ntBASIC19.81■□□□□ 0.76
NPAS2Q99743 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPAS2Q99743 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NPAS2Q99743 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS2Q99743 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS2Q99743 AC104187.1-201ENST00000607510 612 ntBASIC19.81■□□□□ 0.76
NPAS2Q99743 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NPAS2Q99743 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS2Q99743 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NPAS2Q99743 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS2Q99743 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NPAS2Q99743 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.8■□□□□ 0.76
NPAS2Q99743 AC016769.1-201ENST00000409132 1010 ntBASIC19.8■□□□□ 0.76
NPAS2Q99743 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS2Q99743 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS2Q99743 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS2Q99743 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NPAS2Q99743 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NPAS2Q99743 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NPAS2Q99743 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NPAS2Q99743 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS2Q99743 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS2Q99743 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS2Q99743 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NPAS2Q99743 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NPAS2Q99743 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS2Q99743 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS2Q99743 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS2Q99743 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS2Q99743 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.79■□□□□ 0.76
NPAS2Q99743 AC080038.1-201ENST00000611274 1154 ntBASIC19.79■□□□□ 0.76
NPAS2Q99743 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS2Q99743 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS2Q99743 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.78■□□□□ 0.76
NPAS2Q99743 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
NPAS2Q99743 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS2Q99743 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS2Q99743 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
NPAS2Q99743 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms