Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.44■□□□□ 0.22
RAB40CQ96S21 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40CQ96S21 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40CQ96S21 AC125437.2-201ENST00000625180 2167 ntBASIC16.44■□□□□ 0.22
RAB40CQ96S21 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40CQ96S21 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40CQ96S21 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40CQ96S21 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.44■□□□□ 0.22
RAB40CQ96S21 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40CQ96S21 AC005224.4-201ENST00000583262 1652 ntBASIC16.43■□□□□ 0.22
RAB40CQ96S21 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 AL158211.5-201ENST00000623583 2518 ntBASIC16.43■□□□□ 0.22
RAB40CQ96S21 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB40CQ96S21 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40CQ96S21 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40CQ96S21 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40CQ96S21 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 AC053503.5-201ENST00000601508 636 ntBASIC16.41■□□□□ 0.22
RAB40CQ96S21 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40CQ96S21 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 AP000974.1-201ENST00000623909 2387 ntBASIC16.41■□□□□ 0.22
RAB40CQ96S21 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40CQ96S21 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 TMEM179-206ENST00000616017 1645 ntBASIC16.4■□□□□ 0.22
RAB40CQ96S21 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40CQ96S21 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms