Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NECTIN4Q96NY8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.14■□□□□ 0.98
NECTIN4Q96NY8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECTIN4Q96NY8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 UNC93B2-201ENST00000285383 730 ntBASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 AC023632.3-201ENST00000521633 145 ntBASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 AC004264.1-201ENST00000608354 794 ntBASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECTIN4Q96NY8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 RBM17P1-201ENST00000453646 1190 ntBASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 NUDT16P1-203ENST00000513809 620 ntBASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN4Q96NY8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN4Q96NY8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 AC113347.1-201ENST00000413321 391 ntBASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 AL121906.2-201ENST00000621597 723 ntBASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms