Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC46A1Q96NT5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC46A1Q96NT5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC46A1Q96NT5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC46A1Q96NT5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC46A1Q96NT5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 AC120498.8-201ENST00000614275 531 ntBASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 AL135905.2-201ENST00000584934 1404 ntBASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC46A1Q96NT5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SLC46A1Q96NT5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 AC110285.5-201ENST00000611501 352 ntBASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC46A1Q96NT5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 AC239809.2-201ENST00000415381 517 ntBASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 MIR4785-201ENST00000585005 73 ntBASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
SLC46A1Q96NT5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms