Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 MIR3181-201ENST00000578512 73 ntBASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP6Q96FZ7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 AC131281.2-201ENST00000520478 145 ntBASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 MIR4466-201ENST00000606121 54 ntBASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 BX005040.4-201ENST00000637145 1518 ntBASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP6Q96FZ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP6Q96FZ7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
CHMP6Q96FZ7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.39■□□□□ 0.86
CHMP6Q96FZ7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP6Q96FZ7 SYT6-210ENST00000641643 1587 ntBASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP6Q96FZ7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 AC093503.3-201ENST00000624917 2352 ntBASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP6Q96FZ7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 AC093484.2-201ENST00000580996 2166 ntBASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 AL136116.3-201ENST00000402907 1138 ntBASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP6Q96FZ7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms