Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AC005224.4-201ENST00000583262 1652 ntBASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 Z82202.1-201ENST00000623446 1880 ntBASIC20.16■□□□□ 0.82
CKAP2Q8WWK9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 AL512631.2-201ENST00000604634 923 ntBASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKAP2Q8WWK9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 NEFHP1-201ENST00000412845 2629 ntBASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.14■□□□□ 0.81
CKAP2Q8WWK9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 EEF1DP3-203ENST00000566025 782 ntBASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CKAP2Q8WWK9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.12■□□□□ 0.81
CKAP2Q8WWK9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms