Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APH1BQ8WW43 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
APH1BQ8WW43 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1BQ8WW43 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.37■□□□□ 0.53
APH1BQ8WW43 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.37■□□□□ 0.53
APH1BQ8WW43 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APH1BQ8WW43 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.36■□□□□ 0.53
APH1BQ8WW43 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.36■□□□□ 0.53
APH1BQ8WW43 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 AC093503.3-201ENST00000624917 2352 ntBASIC18.36■□□□□ 0.53
APH1BQ8WW43 RARRES2P11-201ENST00000635158 484 ntBASIC18.36■□□□□ 0.53
APH1BQ8WW43 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1BQ8WW43 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.35■□□□□ 0.53
APH1BQ8WW43 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1BQ8WW43 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.34■□□□□ 0.53
APH1BQ8WW43 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 IGHV3-19-201ENST00000521488 291 ntBASIC18.34■□□□□ 0.53
APH1BQ8WW43 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
APH1BQ8WW43 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
APH1BQ8WW43 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
APH1BQ8WW43 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1BQ8WW43 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APH1BQ8WW43 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.33■□□□□ 0.53
APH1BQ8WW43 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.33■□□□□ 0.53
APH1BQ8WW43 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
APH1BQ8WW43 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APH1BQ8WW43 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
APH1BQ8WW43 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.33■□□□□ 0.52
APH1BQ8WW43 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.33■□□□□ 0.52
APH1BQ8WW43 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
APH1BQ8WW43 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
APH1BQ8WW43 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APH1BQ8WW43 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APH1BQ8WW43 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.32■□□□□ 0.52
APH1BQ8WW43 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APH1BQ8WW43 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms