Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 AF201337.1-201ENST00000520239 748 ntBASIC20.55■□□□□ 0.88
PTCD2Q8WV60 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 FAM21FP-204ENST00000608637 956 ntBASIC20.55■□□□□ 0.88
PTCD2Q8WV60 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC20.54■□□□□ 0.88
PTCD2Q8WV60 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCD2Q8WV60 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 AL162412.1-201ENST00000567129 965 ntBASIC20.53■□□□□ 0.88
PTCD2Q8WV60 AC142086.2-201ENST00000569753 217 ntBASIC20.53■□□□□ 0.88
PTCD2Q8WV60 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCD2Q8WV60 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCD2Q8WV60 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.52■□□□□ 0.87
PTCD2Q8WV60 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTCD2Q8WV60 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
PTCD2Q8WV60 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTCD2Q8WV60 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.52■□□□□ 0.87
PTCD2Q8WV60 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTCD2Q8WV60 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms