Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD6Q8TD26 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 AC004870.1-201ENST00000315132 882 ntBASIC18.56■□□□□ 0.56
CHD6Q8TD26 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 ATP5G2P1-201ENST00000433580 426 ntBASIC18.56■□□□□ 0.56
CHD6Q8TD26 HOMER2P1-201ENST00000455653 964 ntBASIC18.56■□□□□ 0.56
CHD6Q8TD26 AL160237.2-201ENST00000556165 472 ntBASIC18.56■□□□□ 0.56
CHD6Q8TD26 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 AL031985.4-201ENST00000642138 673 ntBASIC18.56■□□□□ 0.56
CHD6Q8TD26 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD6Q8TD26 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD6Q8TD26 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD6Q8TD26 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD6Q8TD26 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD6Q8TD26 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD6Q8TD26 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD6Q8TD26 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD6Q8TD26 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD6Q8TD26 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 LINC00526-201ENST00000581067 1875 ntBASIC18.54■□□□□ 0.56
CHD6Q8TD26 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 AP002469.2-201ENST00000531724 424 ntBASIC18.54■□□□□ 0.56
CHD6Q8TD26 AC092865.5-201ENST00000545435 363 ntBASIC18.54■□□□□ 0.56
CHD6Q8TD26 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 AC092119.3-201ENST00000612618 583 ntBASIC18.54■□□□□ 0.56
CHD6Q8TD26 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 IFNL4P1-201ENST00000607083 540 ntBASIC18.54■□□□□ 0.56
CHD6Q8TD26 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD6Q8TD26 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD6Q8TD26 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 AL035633.1-201ENST00000406139 838 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 MIR1233-2-201ENST00000408138 82 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 MIR1233-1-201ENST00000408722 82 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 AC106795.1-205ENST00000512851 1056 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 AL031008.1-201ENST00000619963 541 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 SLC25A6P4-201ENST00000586535 553 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 BX640515.1-201ENST00000617215 977 ntBASIC18.53■□□□□ 0.56
CHD6Q8TD26 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.53■□□□□ 0.56
CHD6Q8TD26 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD6Q8TD26 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD6Q8TD26 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CHD6Q8TD26 MIR3180-1-201ENST00000580374 94 ntBASIC18.52■□□□□ 0.56
CHD6Q8TD26 MIR3180-3-201ENST00000584616 94 ntBASIC18.52■□□□□ 0.56
CHD6Q8TD26 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms