Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 AC093484.2-201ENST00000580996 2166 ntBASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNIH3Q8TBE1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 NEFHP1-201ENST00000412845 2629 ntBASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 KRT16P3-201ENST00000439127 1283 ntBASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 AL356740.2-201ENST00000601559 647 ntBASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNIH3Q8TBE1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.52■□□□□ 0.56
CNIH3Q8TBE1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNIH3Q8TBE1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 AC136469.2-201ENST00000623944 1028 ntBASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 AL035685.1-201ENST00000636663 812 ntBASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNIH3Q8TBE1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNIH3Q8TBE1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms