Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EFCAB3Q8N7B9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 KRT18P11-201ENST00000435214 1283 ntBASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 CD99P1-205ENST00000527459 561 ntBASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFCAB3Q8N7B9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 AC005786.4-201ENST00000623369 682 ntBASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCAB3Q8N7B9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 GPX1P1-201ENST00000388829 606 ntBASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCAB3Q8N7B9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 NCF1B-203ENST00000435988 1254 ntBASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 CROCCP5-201ENST00000436658 830 ntBASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 PAX6-247ENST00000638965 979 ntTSL 5 BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 KRT87P-202ENST00000534226 1464 ntBASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCAB3Q8N7B9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 AL020996.1-203ENST00000536896 2307 ntBASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 AC004854.2-201ENST00000608450 1441 ntBASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.02■□□□□ 0.79
EFCAB3Q8N7B9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFCAB3Q8N7B9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms