Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC9CQ8N5M4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 AC068338.2-201ENST00000563278 1430 ntBASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 AC016405.3-201ENST00000607710 860 ntBASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 AC100791.3-201ENST00000617619 330 ntBASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC9CQ8N5M4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 AC007322.1-201ENST00000426983 750 ntBASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 RARRES2P4-201ENST00000514074 484 ntBASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
TTC9CQ8N5M4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 AC092667.1-201ENST00000434301 2586 ntBASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 AC087633.2-202ENST00000565166 1439 ntBASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9CQ8N5M4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 CYP21A1P-202ENST00000354927 1481 ntBASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9CQ8N5M4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms