Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIST2H3AQ71DI3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HIST2H3AQ71DI3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HIST2H3AQ71DI3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.84■□□□□ 0.45
HIST2H3AQ71DI3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HIST2H3AQ71DI3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 AC016405.3-201ENST00000607710 860 ntBASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIST2H3AQ71DI3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 AC011767.1-201ENST00000617410 1153 ntBASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 AL512408.1-201ENST00000569378 2000 ntBASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIST2H3AQ71DI3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 AC068338.2-201ENST00000563278 1430 ntBASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 AC087633.2-202ENST00000565166 1439 ntBASIC17.81■□□□□ 0.44
HIST2H3AQ71DI3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 AC022517.1-201ENST00000592429 346 ntBASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.8■□□□□ 0.44
HIST2H3AQ71DI3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms