Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 AC068587.7-201ENST00000641602 218 ntBASIC17.61■□□□□ 0.41
C11orf88Q6PI97 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf88Q6PI97 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf88Q6PI97 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 AL358852.1-201ENST00000623174 1268 ntBASIC17.59■□□□□ 0.41
C11orf88Q6PI97 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C11orf88Q6PI97 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
C11orf88Q6PI97 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C11orf88Q6PI97 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.58■□□□□ 0.41
C11orf88Q6PI97 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
C11orf88Q6PI97 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
C11orf88Q6PI97 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 OR2I1P-207ENST00000453522 948 ntBASIC17.58■□□□□ 0.4
C11orf88Q6PI97 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 AL034346.1-201ENST00000568244 1277 ntBASIC17.58■□□□□ 0.4
C11orf88Q6PI97 AC087239.1-201ENST00000622671 572 ntBASIC17.58■□□□□ 0.4
C11orf88Q6PI97 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C11orf88Q6PI97 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms