Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 AC073195.1-201ENST00000607241 877 ntBASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22■■□□□ 1.11
CNKSR3Q6P9H4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 KRT18P35-201ENST00000510488 1269 ntBASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 AL121906.2-201ENST00000621597 723 ntBASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 AC124283.5-201ENST00000624661 1809 ntBASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
CNKSR3Q6P9H4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 AC145285.6-201ENST00000604632 637 ntBASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 AC011484.1-201ENST00000377652 1995 ntBASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CNKSR3Q6P9H4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 MIR6786-201ENST00000616843 113 ntBASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 AC092865.7-201ENST00000641832 219 ntBASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNKSR3Q6P9H4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms