Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 AC019069.1-201ENST00000610008 1333 ntBASIC18.92■□□□□ 0.62
REEP3Q6NUK4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 KRT19P1-201ENST00000405746 1186 ntBASIC18.91■□□□□ 0.62
REEP3Q6NUK4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
REEP3Q6NUK4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.9■□□□□ 0.62
REEP3Q6NUK4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 FAM21FP-204ENST00000608637 956 ntBASIC18.9■□□□□ 0.62
REEP3Q6NUK4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
REEP3Q6NUK4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
REEP3Q6NUK4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
REEP3Q6NUK4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 CDV3P1-201ENST00000471403 739 ntBASIC18.88■□□□□ 0.61
REEP3Q6NUK4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
REEP3Q6NUK4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms