Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 AC124283.5-201ENST00000624661 1809 ntBASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 AC093323.1-202ENST00000635031 2045 ntBASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTCRAQ6ISU1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 LINC01238-205ENST00000567549 1107 ntBASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 AC027702.1-201ENST00000563810 1770 ntBASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTCRAQ6ISU1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 AK4P3-201ENST00000418260 669 ntBASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCRAQ6ISU1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 KSR1P1-201ENST00000446298 240 ntBASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 AC022616.7-201ENST00000525383 220 ntBASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 AL121906.2-201ENST00000621597 723 ntBASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PTCRAQ6ISU1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTCRAQ6ISU1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTCRAQ6ISU1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTCRAQ6ISU1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 CRYGFP-201ENST00000418459 633 ntBASIC21.06■□□□□ 0.96
PTCRAQ6ISU1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms