Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LPCAT4Q643R3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 AL049812.1-201ENST00000432563 2267 ntBASIC19.13■□□□□ 0.65
LPCAT4Q643R3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT4Q643R3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.12■□□□□ 0.65
LPCAT4Q643R3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 AC010525.1-201ENST00000585559 441 ntBASIC19.12■□□□□ 0.65
LPCAT4Q643R3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT4Q643R3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 BX664725.1-201ENST00000438252 379 ntBASIC19.11■□□□□ 0.65
LPCAT4Q643R3 AL031848.2-201ENST00000607670 837 ntBASIC19.11■□□□□ 0.65
LPCAT4Q643R3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 Z82202.1-201ENST00000623446 1880 ntBASIC19.11■□□□□ 0.65
LPCAT4Q643R3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT4Q643R3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 AC092028.1-203ENST00000608262 953 ntBASIC19.1■□□□□ 0.65
LPCAT4Q643R3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 TREX1-205ENST00000625293 1783 ntBASIC19.1■□□□□ 0.65
LPCAT4Q643R3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT4Q643R3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms