Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 TSPY14P-201ENST00000303979 915 ntBASIC17.81■□□□□ 0.44
LRRK2Q5S007 AP000593.1-201ENST00000393668 712 ntBASIC17.81■□□□□ 0.44
LRRK2Q5S007 NIFKP9-201ENST00000419265 221 ntBASIC17.81■□□□□ 0.44
LRRK2Q5S007 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 AC139887.4-201ENST00000607877 719 ntBASIC17.81■□□□□ 0.44
LRRK2Q5S007 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 FDX1P1-201ENST00000449115 551 ntBASIC17.8■□□□□ 0.44
LRRK2Q5S007 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRK2Q5S007 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRK2Q5S007 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRK2Q5S007 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRK2Q5S007 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.8■□□□□ 0.44
LRRK2Q5S007 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRK2Q5S007 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRK2Q5S007 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRK2Q5S007 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRK2Q5S007 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRK2Q5S007 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRK2Q5S007 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRK2Q5S007 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRK2Q5S007 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRK2Q5S007 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.78■□□□□ 0.44
LRRK2Q5S007 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRK2Q5S007 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.78■□□□□ 0.44
LRRK2Q5S007 KRT16P1-201ENST00000399124 1418 ntBASIC17.78■□□□□ 0.44
LRRK2Q5S007 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRK2Q5S007 AC020928.2-201ENST00000588717 2197 ntBASIC17.78■□□□□ 0.44
LRRK2Q5S007 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRK2Q5S007 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 AP000347.1-202ENST00000435868 847 ntBASIC17.77■□□□□ 0.44
LRRK2Q5S007 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRK2Q5S007 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRK2Q5S007 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRK2Q5S007 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 AC010203.1-204ENST00000548782 407 ntBASIC17.76■□□□□ 0.43
LRRK2Q5S007 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms