Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 AC003102.1-202ENST00000563394 1796 ntBASIC19.81■□□□□ 0.76
SFT2D3Q587I9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 AC080038.1-201ENST00000611274 1154 ntBASIC19.81■□□□□ 0.76
SFT2D3Q587I9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 PLK5-205ENST00000642079 1969 ntBASIC19.81■□□□□ 0.76
SFT2D3Q587I9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SFT2D3Q587I9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
SFT2D3Q587I9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 AC090192.1-201ENST00000517740 490 ntBASIC19.8■□□□□ 0.76
SFT2D3Q587I9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 UBE2DNL-204ENST00000602536 740 ntBASIC19.8■□□□□ 0.76
SFT2D3Q587I9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.8■□□□□ 0.76
SFT2D3Q587I9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D3Q587I9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 AC011767.1-201ENST00000617410 1153 ntBASIC19.78■□□□□ 0.76
SFT2D3Q587I9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D3Q587I9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D3Q587I9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
SFT2D3Q587I9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SFT2D3Q587I9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.76■□□□□ 0.75
SFT2D3Q587I9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms