Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 AC124067.4-201ENST00000519691 2379 ntBASIC10.19□□□□□ -0.78
LINC01554Q52M75 AC009053.2-201ENST00000563701 2365 ntBASIC10.19□□□□□ -0.78
LINC01554Q52M75 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01554Q52M75 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC01554Q52M75 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 AC139713.2-201ENST00000641328 2723 ntBASIC10.18□□□□□ -0.78
LINC01554Q52M75 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 AL592293.1-201ENST00000502889 1188 ntBASIC10.18□□□□□ -0.78
LINC01554Q52M75 ABHD17AP3-201ENST00000503096 1137 ntBASIC10.18□□□□□ -0.78
LINC01554Q52M75 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 MIR6765-201ENST00000614092 87 ntBASIC10.18□□□□□ -0.78
LINC01554Q52M75 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 AC092068.2-201ENST00000590491 1708 ntBASIC10.18□□□□□ -0.78
LINC01554Q52M75 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC01554Q52M75 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC01554Q52M75 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 TNXA-203ENST00000507684 2038 ntBASIC10.17□□□□□ -0.78
LINC01554Q52M75 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 EI24-213ENST00000618552 1747 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SSSCA1-AS1-201ENST00000567594 614 ntBASIC10.17□□□□□ -0.78
LINC01554Q52M75 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms