Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RFX4Q33E94 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RFX4Q33E94 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX4Q33E94 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX4Q33E94 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX4Q33E94 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 AC096631.2-201ENST00000436136 790 ntBASIC18.84■□□□□ 0.61
RFX4Q33E94 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX4Q33E94 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX4Q33E94 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX4Q33E94 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.84■□□□□ 0.61
RFX4Q33E94 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX4Q33E94 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFX4Q33E94 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RFX4Q33E94 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
RFX4Q33E94 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX4Q33E94 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX4Q33E94 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX4Q33E94 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX4Q33E94 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX4Q33E94 AC008406.3-201ENST00000620001 1374 ntBASIC18.83■□□□□ 0.61
RFX4Q33E94 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX4Q33E94 TNXA-203ENST00000507684 2038 ntBASIC18.83■□□□□ 0.61
RFX4Q33E94 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RFX4Q33E94 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX4Q33E94 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX4Q33E94 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RFX4Q33E94 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX4Q33E94 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.83■□□□□ 0.6
RFX4Q33E94 AC106739.1-201ENST00000617035 715 ntBASIC18.83■□□□□ 0.6
RFX4Q33E94 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX4Q33E94 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFX4Q33E94 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RFX4Q33E94 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX4Q33E94 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.83■□□□□ 0.6
RFX4Q33E94 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX4Q33E94 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFX4Q33E94 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX4Q33E94 AC125437.2-201ENST00000625180 2167 ntBASIC18.82■□□□□ 0.6
RFX4Q33E94 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFX4Q33E94 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX4Q33E94 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFX4Q33E94 EDA-201ENST00000338901 1233 ntBASIC18.82■□□□□ 0.6
RFX4Q33E94 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFX4Q33E94 MIR572-201ENST00000384983 95 ntBASIC18.82■□□□□ 0.6
RFX4Q33E94 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX4Q33E94 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX4Q33E94 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.82■□□□□ 0.6
RFX4Q33E94 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX4Q33E94 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX4Q33E94 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX4Q33E94 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX4Q33E94 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 AP000974.1-201ENST00000623909 2387 ntBASIC18.81■□□□□ 0.6
RFX4Q33E94 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.81■□□□□ 0.6
RFX4Q33E94 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RFX4Q33E94 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX4Q33E94 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX4Q33E94 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms