Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RSPO4Q2I0M5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 AC093458.2-201ENST00000623150 629 ntBASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 MYC-208ENST00000641036 567 ntBASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 AC003102.1-202ENST00000563394 1796 ntBASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RSPO4Q2I0M5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 ECEL1P2-202ENST00000465689 757 ntBASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 AL691432.3-201ENST00000621860 400 ntBASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RSPO4Q2I0M5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 CR392000.1-201ENST00000624770 1228 ntBASIC19.77■□□□□ 0.76
RSPO4Q2I0M5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RSPO4Q2I0M5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.77■□□□□ 0.75
RSPO4Q2I0M5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RSPO4Q2I0M5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 GPALPP1-207ENST00000611650 899 ntBASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 C11orf96-202ENST00000528572 1834 ntBASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RSPO4Q2I0M5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.75■□□□□ 0.75
RSPO4Q2I0M5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RSPO4Q2I0M5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms