Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 UBE2SP1-201ENST00000450587 669 ntBASIC24.5■■□□□ 1.51
PDS5AQ29RF7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDS5AQ29RF7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 PLK5-205ENST00000642079 1969 ntBASIC24.49■■□□□ 1.51
PDS5AQ29RF7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 AC006557.6-201ENST00000623071 864 ntBASIC24.49■■□□□ 1.51
PDS5AQ29RF7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDS5AQ29RF7 LINC00565-201ENST00000562710 2331 ntBASIC24.49■■□□□ 1.51
PDS5AQ29RF7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
PDS5AQ29RF7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 AC133681.1-201ENST00000465482 601 ntBASIC24.47■■□□□ 1.51
PDS5AQ29RF7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 C1QBPP2-201ENST00000528754 825 ntBASIC24.47■■□□□ 1.51
PDS5AQ29RF7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.47■■□□□ 1.51
PDS5AQ29RF7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 PTBP1P-201ENST00000554374 1601 ntBASIC24.46■■□□□ 1.51
PDS5AQ29RF7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PDS5AQ29RF7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
PDS5AQ29RF7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PDS5AQ29RF7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.45■■□□□ 1.5
PDS5AQ29RF7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms