Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CD47Q08722 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CD47Q08722 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD47Q08722 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.82■□□□□ 0.6
CD47Q08722 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.82■□□□□ 0.6
CD47Q08722 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.82■□□□□ 0.6
CD47Q08722 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.82■□□□□ 0.6
CD47Q08722 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.82■□□□□ 0.6
CD47Q08722 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD47Q08722 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.81■□□□□ 0.6
CD47Q08722 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
CD47Q08722 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 AC004408.2-201ENST00000623613 2777 ntBASIC18.81■□□□□ 0.6
CD47Q08722 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.81■□□□□ 0.6
CD47Q08722 AL354811.1-201ENST00000610286 706 ntBASIC18.81■□□□□ 0.6
CD47Q08722 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.81■□□□□ 0.6
CD47Q08722 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.81■□□□□ 0.6
CD47Q08722 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.81■□□□□ 0.6
CD47Q08722 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CD47Q08722 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD47Q08722 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CD47Q08722 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
CD47Q08722 AC055733.4-201ENST00000638462 1354 ntBASIC18.81■□□□□ 0.6
CD47Q08722 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.8■□□□□ 0.6
CD47Q08722 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.8■□□□□ 0.6
CD47Q08722 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.8■□□□□ 0.6
CD47Q08722 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 AC105265.2-201ENST00000467189 838 ntBASIC18.8■□□□□ 0.6
CD47Q08722 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD47Q08722 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD47Q08722 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD47Q08722 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.8■□□□□ 0.6
CD47Q08722 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.8■□□□□ 0.6
CD47Q08722 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD47Q08722 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.79■□□□□ 0.6
CD47Q08722 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.79■□□□□ 0.6
CD47Q08722 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.79■□□□□ 0.6
CD47Q08722 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.79■□□□□ 0.6
CD47Q08722 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.79■□□□□ 0.6
CD47Q08722 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.79■□□□□ 0.6
CD47Q08722 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.79■□□□□ 0.6
CD47Q08722 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 AL358852.1-201ENST00000623174 1268 ntBASIC18.79■□□□□ 0.6
CD47Q08722 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD47Q08722 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD47Q08722 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.79■□□□□ 0.6
CD47Q08722 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD47Q08722 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD47Q08722 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.78■□□□□ 0.6
CD47Q08722 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD47Q08722 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD47Q08722 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD47Q08722 MIR638-201ENST00000385237 100 ntBASIC18.78■□□□□ 0.6
CD47Q08722 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD47Q08722 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD47Q08722 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms