Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YBP2YGL060W 1926 nt-0.34□□□□□ -2.46
VPS13Q07878 SRG1SRG1 551 nt-0.35□□□□□ -2.46
VPS13Q07878 YIL161WYIL161W 708 nt-0.35□□□□□ -2.47
VPS13Q07878 MFB1YDR219C 1398 nt-0.36□□□□□ -2.47
VPS13Q07878 YER066C-AYER066C-A 501 nt-0.36□□□□□ -2.47
VPS13Q07878 SPS2YDR522C 1509 nt-0.36□□□□□ -2.47
VPS13Q07878 YJL022WYJL022W 309 nt-0.36□□□□□ -2.47
VPS13Q07878 YLR444CYLR444C 303 nt-0.37□□□□□ -2.47
VPS13Q07878 AIM14YGL160W 1713 nt-0.37□□□□□ -2.47
VPS13Q07878 SSS1YDR086C 243 nt-0.37□□□□□ -2.47
VPS13Q07878 YBL039C-AYBL039C-A 84 nt-0.38□□□□□ -2.47
VPS13Q07878 DLT1YMR126C 1029 nt-0.38□□□□□ -2.47
VPS13Q07878 NME1NME1 340 nt-0.38□□□□□ -2.47
VPS13Q07878 YSW1YBR148W 1830 nt-0.38□□□□□ -2.47
VPS13Q07878 SLM6YBR266C 453 nt-0.38□□□□□ -2.47
VPS13Q07878 COX1Q0045 1605 nt-0.38□□□□□ -2.47
VPS13Q07878 MMS2YGL087C 414 nt-0.39□□□□□ -2.47
VPS13Q07878 MVP1YMR004W 1536 nt-0.39□□□□□ -2.47
VPS13Q07878 COG6YNL041C 2520 nt-0.39□□□□□ -2.47
VPS13Q07878 AAH1YNL141W 1044 nt-0.39□□□□□ -2.47
VPS13Q07878 YBR071WYBR071W 636 nt-0.39□□□□□ -2.47
VPS13Q07878 YTH1YPR107C 627 nt-0.39□□□□□ -2.47
VPS13Q07878 SLS1YLR139C 1932 nt-0.39□□□□□ -2.47
VPS13Q07878 PES4YFR023W 1836 nt-0.39□□□□□ -2.47
VPS13Q07878 YLL020CYLL020C 306 nt-0.4□□□□□ -2.47
VPS13Q07878 LSM7YNL147W 348 nt-0.4□□□□□ -2.47
VPS13Q07878 21S_rRNA21S_rRNA 3296 nt-0.4□□□□□ -2.47
VPS13Q07878 SRN2YLR119W 642 nt-0.4□□□□□ -2.47
VPS13Q07878 GIM3YNL153C 390 nt-0.4□□□□□ -2.47
VPS13Q07878 PFK27YOL136C 1194 nt-0.4□□□□□ -2.47
VPS13Q07878 IRC23YOR044W 474 nt-0.4□□□□□ -2.47
VPS13Q07878 YPR148CYPR148C 1308 nt-0.4□□□□□ -2.47
VPS13Q07878 YEL030C-AYEL030C-A 315 nt-0.4□□□□□ -2.47
VPS13Q07878 STB6YKL072W 2301 nt-0.41□□□□□ -2.47
VPS13Q07878 PET111YMR257C 2403 nt-0.41□□□□□ -2.48
VPS13Q07878 CTR86YCR054C 1692 nt-0.41□□□□□ -2.48
VPS13Q07878 REV7YIL139C 738 nt-0.42□□□□□ -2.48
VPS13Q07878 TBS1YBR150C 3285 nt-0.42□□□□□ -2.48
VPS13Q07878 SWT1YOR166C 1377 nt-0.42□□□□□ -2.48
VPS13Q07878 MON1YGL124C 1935 nt-0.42□□□□□ -2.48
VPS13Q07878 POL32YJR043C 1053 nt-0.42□□□□□ -2.48
VPS13Q07878 BDP1YNL039W 1785 nt-0.42□□□□□ -2.48
VPS13Q07878 SWI5YDR146C 2130 nt-0.43□□□□□ -2.48
VPS13Q07878 YOL114CYOL114C 609 nt-0.43□□□□□ -2.48
VPS13Q07878 VMA7YGR020C 357 nt-0.43□□□□□ -2.48
VPS13Q07878 snR33snR33 183 nt-0.43□□□□□ -2.48
VPS13Q07878 NUP120YKL057C 3114 nt-0.43□□□□□ -2.48
VPS13Q07878 YOR314WYOR314W 330 nt-0.44□□□□□ -2.48
VPS13Q07878 RAD61YDR014W 1944 nt-0.44□□□□□ -2.48
VPS13Q07878 YLR042CYLR042C 486 nt-0.44□□□□□ -2.48
VPS13Q07878 RCN2YOR220W 798 nt-0.44□□□□□ -2.48
VPS13Q07878 KAR3YPR141C 2190 nt-0.44□□□□□ -2.48
VPS13Q07878 YJL127W-AYJL127W-A 117 nt-0.44□□□□□ -2.48
VPS13Q07878 YDR261W-AYDR261W-A 1317 nt-0.45□□□□□ -2.48
VPS13Q07878 FYV6YNL133C 522 nt-0.45□□□□□ -2.48
VPS13Q07878 UBC5YDR059C 447 nt-0.45□□□□□ -2.48
VPS13Q07878 YPR153WYPR153W 423 nt-0.45□□□□□ -2.48
VPS13Q07878 FUS1YCL027W 1539 nt-0.45□□□□□ -2.48
VPS13Q07878 TGL2YDR058C 981 nt-0.46□□□□□ -2.48
VPS13Q07878 SBH2YER019C-A 267 nt-0.46□□□□□ -2.48
VPS13Q07878 YIL068W-AYIL068W-A 384 nt-0.46□□□□□ -2.48
VPS13Q07878 GRX8YLR364W 330 nt-0.46□□□□□ -2.48
VPS13Q07878 SEC5YDR166C 2916 nt-0.46□□□□□ -2.48
VPS13Q07878 MUS81YDR386W 1899 nt-0.46□□□□□ -2.48
VPS13Q07878 CSI2YOL007C 1026 nt-0.47□□□□□ -2.48
VPS13Q07878 EFR3YMR212C 2349 nt-0.47□□□□□ -2.48
VPS13Q07878 CCE1YKL011C 1062 nt-0.47□□□□□ -2.49
VPS13Q07878 RRT16YNL105W 429 nt-0.47□□□□□ -2.49
VPS13Q07878 RNA1YMR235C 1224 nt-0.48□□□□□ -2.49
VPS13Q07878 CRM1YGR218W 3255 nt-0.48□□□□□ -2.49
VPS13Q07878 HNT3YOR258W 654 nt-0.48□□□□□ -2.49
VPS13Q07878 snR161snR161 161 nt-0.49□□□□□ -2.49
VPS13Q07878 RRT7YLL030C 342 nt-0.49□□□□□ -2.49
VPS13Q07878 YHL009W-AYHL009W-A 1242 nt-0.49□□□□□ -2.49
VPS13Q07878 NOC3YLR002C 1992 nt-0.5□□□□□ -2.49
VPS13Q07878 TAR1YLR154W-C 375 nt-0.51□□□□□ -2.49
VPS13Q07878 RXT2YBR095C 1293 nt-0.51□□□□□ -2.49
VPS13Q07878 MNE1YOR350C 1992 nt-0.51□□□□□ -2.49
VPS13Q07878 RTR1YER139C 681 nt-0.51□□□□□ -2.49
VPS13Q07878 ACB1YGR037C 264 nt-0.51□□□□□ -2.49
VPS13Q07878 YDR114CYDR114C 303 nt-0.52□□□□□ -2.49
VPS13Q07878 UPS2YLR168C 693 nt-0.52□□□□□ -2.49
VPS13Q07878 YBL077WYBL077W 432 nt-0.52□□□□□ -2.49
VPS13Q07878 YJR011CYJR011C 786 nt-0.53□□□□□ -2.49
VPS13Q07878 AIM36YMR157C 768 nt-0.53□□□□□ -2.49
VPS13Q07878 TIM8YJR135W-A 264 nt-0.53□□□□□ -2.49
VPS13Q07878 YGR039WYGR039W 312 nt-0.54□□□□□ -2.5
VPS13Q07878 YKL177WYKL177W 339 nt-0.54□□□□□ -2.5
VPS13Q07878 RNP1YLL046C 750 nt-0.54□□□□□ -2.5
VPS13Q07878 RPB10YOR210W 213 nt-0.54□□□□□ -2.5
VPS13Q07878 YOP1YPR028W 543 nt-0.54□□□□□ -2.5
VPS13Q07878 RFX1YLR176C 2436 nt-0.54□□□□□ -2.5
VPS13Q07878 YCR015CYCR015C 954 nt-0.54□□□□□ -2.5
VPS13Q07878 SBH1YER087C-B 249 nt-0.54□□□□□ -2.5
VPS13Q07878 MUB1YMR100W 1863 nt-0.55□□□□□ -2.5
VPS13Q07878 YDL157CYDL157C 357 nt-0.55□□□□□ -2.5
VPS13Q07878 SMD1YGR074W 441 nt-0.55□□□□□ -2.5
VPS13Q07878 RPB5YBR154C 648 nt-0.55□□□□□ -2.5
VPS13Q07878 PIG1YLR273C 1947 nt-0.56□□□□□ -2.5
VPS13Q07878 SLD5YDR489W 885 nt-0.56□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms