Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 NFU1YKL040C 771 nt2.63□□□□□ -1.99
BRE1Q07457 SHE2YKL130C 741 nt2.63□□□□□ -1.99
BRE1Q07457 YKL165C-AYKL165C-A 234 nt2.63□□□□□ -1.99
BRE1Q07457 SWR1YDR334W 4545 nt2.63□□□□□ -1.99
BRE1Q07457 SSD1YDR293C 3753 nt2.62□□□□□ -1.99
BRE1Q07457 snR79snR79 84 nt2.62□□□□□ -1.99
BRE1Q07457 SWF1YDR126W 1011 nt2.62□□□□□ -1.99
BRE1Q07457 YER079WYER079W 633 nt2.62□□□□□ -1.99
BRE1Q07457 PEX4YGR133W 552 nt2.62□□□□□ -1.99
BRE1Q07457 KTI11YBL071W-A 249 nt2.62□□□□□ -1.99
BRE1Q07457 LSM7YNL147W 348 nt2.62□□□□□ -1.99
BRE1Q07457 ERP4YOR016C 624 nt2.62□□□□□ -1.99
BRE1Q07457 YOR053WYOR053W 342 nt2.62□□□□□ -1.99
BRE1Q07457 ROX1YPR065W 1107 nt2.62□□□□□ -1.99
BRE1Q07457 YBR285WYBR285W 435 nt2.62□□□□□ -1.99
BRE1Q07457 COX1Q0045 1605 nt2.61□□□□□ -1.99
BRE1Q07457 SAP185YJL098W 3177 nt2.61□□□□□ -1.99
BRE1Q07457 MPH1YIR002C 2982 nt2.61□□□□□ -1.99
BRE1Q07457 VPH1YOR270C 2523 nt2.61□□□□□ -1.99
BRE1Q07457 TOF1YNL273W 3717 nt2.6□□□□□ -1.99
BRE1Q07457 UTP22YGR090W 3714 nt2.6□□□□□ -1.99
BRE1Q07457 RTT101YJL047C 2529 nt2.6□□□□□ -1.99
BRE1Q07457 RRF1YHR038W 693 nt2.6□□□□□ -1.99
BRE1Q07457 YAL059C-AYAL059C-A 423 nt2.6□□□□□ -1.99
BRE1Q07457 YPL261CYPL261C 309 nt2.6□□□□□ -1.99
BRE1Q07457 SPC72YAL047C 1869 nt2.6□□□□□ -1.99
BRE1Q07457 KAP123YER110C 3342 nt2.6□□□□□ -1.99
BRE1Q07457 DAS1YJL149W 1992 nt2.6□□□□□ -1.99
BRE1Q07457 GIP3YPL137C 3831 nt2.59□□□□□ -1.99
BRE1Q07457 IPT1YDR072C 1584 nt2.59□□□□□ -1.99
BRE1Q07457 CDC50YCR094W 1176 nt2.59□□□□□ -1.99
BRE1Q07457 SDH7YDR511W 402 nt2.59□□□□□ -1.99
BRE1Q07457 GCN4YEL009C 846 nt2.59□□□□□ -1.99
BRE1Q07457 YOR293C-AYOR293C-A 150 nt2.59□□□□□ -1.99
BRE1Q07457 EGD1YPL037C 474 nt2.59□□□□□ -1.99
BRE1Q07457 DIE2YGR227W 1578 nt2.58□□□□□ -2
BRE1Q07457 SIR4YDR227W 4077 nt2.58□□□□□ -2
BRE1Q07457 LSO2YGR169C-A 279 nt2.58□□□□□ -2
BRE1Q07457 YHR138CYHR138C 345 nt2.58□□□□□ -2
BRE1Q07457 YLR287CYLR287C 1068 nt2.58□□□□□ -2
BRE1Q07457 GRX8YLR364W 330 nt2.58□□□□□ -2
BRE1Q07457 RPS22BYLR367W 393 nt2.58□□□□□ -2
BRE1Q07457 YMR324CYMR324C 243 nt2.58□□□□□ -2
BRE1Q07457 BNI1YNL271C 5862 nt2.57□□□□□ -2
BRE1Q07457 COS111YBR203W 2775 nt2.57□□□□□ -2
BRE1Q07457 MET18YIL128W 3099 nt2.57□□□□□ -2
BRE1Q07457 GIM4YEL003W 336 nt2.57□□□□□ -2
BRE1Q07457 RPS24AYER074W 408 nt2.57□□□□□ -2
BRE1Q07457 YJL052C-AYJL052C-A 120 nt2.57□□□□□ -2
BRE1Q07457 SEC22YLR268W 645 nt2.57□□□□□ -2
BRE1Q07457 RPS18BYML026C 441 nt2.57□□□□□ -2
BRE1Q07457 DNF1YER166W 4716 nt2.57□□□□□ -2
BRE1Q07457 KAR3YPR141C 2190 nt2.57□□□□□ -2
BRE1Q07457 UFD4YKL010C 4452 nt2.57□□□□□ -2
BRE1Q07457 YOL098CYOL098C 3114 nt2.57□□□□□ -2
BRE1Q07457 MKT1YNL085W 2493 nt2.56□□□□□ -2
BRE1Q07457 tR(ACG)Q2tR(ACG)Q2 74 nt2.56□□□□□ -2
BRE1Q07457 YHR052W-AYHR052W-A 195 nt2.56□□□□□ -2
BRE1Q07457 YHR054W-AYHR054W-A 195 nt2.56□□□□□ -2
BRE1Q07457 YAL068W-AYAL068W-A 255 nt2.56□□□□□ -2
BRE1Q07457 NAN1YPL126W 2691 nt2.56□□□□□ -2
BRE1Q07457 BFA1YJR053W 1725 nt2.56□□□□□ -2
BRE1Q07457 ALK2YBL009W 2031 nt2.56□□□□□ -2
BRE1Q07457 YFR016CYFR016C 3702 nt2.55□□□□□ -2
BRE1Q07457 URM1YIL008W 300 nt2.55□□□□□ -2
BRE1Q07457 TRL1YJL087C 2484 nt2.55□□□□□ -2
BRE1Q07457 ATP7YKL016C 525 nt2.55□□□□□ -2
BRE1Q07457 RGA1YOR127W 3024 nt2.55□□□□□ -2
BRE1Q07457 YOR192C-CYOR192C-C 237 nt2.55□□□□□ -2
BRE1Q07457 YAR047CYAR047C 321 nt2.54□□□□□ -2
BRE1Q07457 YOR029WYOR029W 336 nt2.54□□□□□ -2
BRE1Q07457 RTC6YPL183W-A 282 nt2.54□□□□□ -2
BRE1Q07457 YPR146CYPR146C 330 nt2.54□□□□□ -2
BRE1Q07457 MMS22YLR320W 4365 nt2.54□□□□□ -2
BRE1Q07457 RTT107YHR154W 3213 nt2.54□□□□□ -2
BRE1Q07457 SGD1YLR336C 2700 nt2.53□□□□□ -2
BRE1Q07457 CBS1YDL069C 690 nt2.53□□□□□ -2
BRE1Q07457 NOP10YHR072W-A 177 nt2.53□□□□□ -2
BRE1Q07457 RPS24BYIL069C 408 nt2.53□□□□□ -2
BRE1Q07457 SNC1YAL030W 354 nt2.53□□□□□ -2
BRE1Q07457 SNC2YOR327C 348 nt2.53□□□□□ -2
BRE1Q07457 YPL185WYPL185W 396 nt2.53□□□□□ -2
BRE1Q07457 RUD3YOR216C 1455 nt2.52□□□□□ -2.01
BRE1Q07457 CDC60YPL160W 3273 nt2.52□□□□□ -2.01
BRE1Q07457 BRP1YGL007W 378 nt2.52□□□□□ -2.01
BRE1Q07457 Q0142Q0142 177 nt2.52□□□□□ -2.01
BRE1Q07457 FCF2YLR051C 654 nt2.52□□□□□ -2.01
BRE1Q07457 IRC8YJL051W 2469 nt2.51□□□□□ -2.01
BRE1Q07457 CRM1YGR218W 3255 nt2.51□□□□□ -2.01
BRE1Q07457 PUT3YKL015W 2940 nt2.51□□□□□ -2.01
BRE1Q07457 MSL1YIR009W 336 nt2.51□□□□□ -2.01
BRE1Q07457 UBP1YDL122W 2430 nt2.51□□□□□ -2.01
BRE1Q07457 VPS8YAL002W 3825 nt2.51□□□□□ -2.01
BRE1Q07457 CDC24YAL041W 2565 nt2.5□□□□□ -2.01
BRE1Q07457 YER121WYER121W 345 nt2.5□□□□□ -2.01
BRE1Q07457 YGL024WYGL024W 336 nt2.5□□□□□ -2.01
BRE1Q07457 BSC3YLR465C 309 nt2.5□□□□□ -2.01
BRE1Q07457 YBL071CYBL071C 309 nt2.5□□□□□ -2.01
BRE1Q07457 MRPL50YNR022C 420 nt2.5□□□□□ -2.01
BRE1Q07457 RIC1YLR039C 3171 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 96.8 ms