Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNX1T1Q06455 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RUNX1T1Q06455 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.68■□□□□ 0.58
RUNX1T1Q06455 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RUNX1T1Q06455 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNX1T1Q06455 LINC02228-203ENST00000641970 1355 ntBASIC18.68■□□□□ 0.58
RUNX1T1Q06455 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNX1T1Q06455 AC073314.1-201ENST00000568729 2216 ntBASIC18.68■□□□□ 0.58
RUNX1T1Q06455 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNX1T1Q06455 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 AC061975.6-201ENST00000579045 1553 ntBASIC18.66■□□□□ 0.58
RUNX1T1Q06455 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNX1T1Q06455 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 KRT87P-202ENST00000534226 1464 ntBASIC18.65■□□□□ 0.58
RUNX1T1Q06455 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNX1T1Q06455 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 AC006128.1-201ENST00000624704 1661 ntBASIC18.64■□□□□ 0.57
RUNX1T1Q06455 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 AC123595.1-201ENST00000440769 1046 ntBASIC18.64■□□□□ 0.57
RUNX1T1Q06455 YBX1P1-201ENST00000445822 960 ntBASIC18.64■□□□□ 0.57
RUNX1T1Q06455 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNX1T1Q06455 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms