Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.3□□□□□ -0.6
SEC61GP60059 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SEC61GP60059 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.29□□□□□ -0.6
SEC61GP60059 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SEC61GP60059 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.29□□□□□ -0.6
SEC61GP60059 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.29□□□□□ -0.6
SEC61GP60059 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 ANOS2P-203ENST00000472227 1816 ntBASIC11.29□□□□□ -0.6
SEC61GP60059 PCDHB18P-201ENST00000524813 2368 ntBASIC11.29□□□□□ -0.6
SEC61GP60059 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SEC61GP60059 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
SEC61GP60059 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SEC61GP60059 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC11.29□□□□□ -0.6
SEC61GP60059 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SEC61GP60059 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SEC61GP60059 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
SEC61GP60059 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SEC61GP60059 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SEC61GP60059 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.28□□□□□ -0.6
SEC61GP60059 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC11.28□□□□□ -0.6
SEC61GP60059 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SEC61GP60059 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC11.28□□□□□ -0.6
SEC61GP60059 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.28□□□□□ -0.6
SEC61GP60059 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC11.28□□□□□ -0.6
SEC61GP60059 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SEC61GP60059 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
SEC61GP60059 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SEC61GP60059 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SEC61GP60059 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SEC61GP60059 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
SEC61GP60059 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SEC61GP60059 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms