Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGA2P52926 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGA2P52926 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGA2P52926 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGA2P52926 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGA2P52926 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
HMGA2P52926 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGA2P52926 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGA2P52926 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGA2P52926 KRT18P20-201ENST00000548986 1279 ntBASIC18.55■□□□□ 0.56
HMGA2P52926 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGA2P52926 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGA2P52926 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGA2P52926 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HMGA2P52926 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGA2P52926 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
HMGA2P52926 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HMGA2P52926 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HMGA2P52926 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGA2P52926 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGA2P52926 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HMGA2P52926 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HMGA2P52926 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGA2P52926 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGA2P52926 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGA2P52926 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGA2P52926 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HMGA2P52926 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGA2P52926 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.53■□□□□ 0.56
HMGA2P52926 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 CCDC92B-201ENST00000575506 885 ntBASIC18.53■□□□□ 0.56
HMGA2P52926 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGA2P52926 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGA2P52926 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 AC005332.7-201ENST00000614046 2005 ntBASIC18.52■□□□□ 0.56
HMGA2P52926 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HMGA2P52926 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
HMGA2P52926 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGA2P52926 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 SLC7A5P1-201ENST00000568957 537 ntBASIC18.52■□□□□ 0.56
HMGA2P52926 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 AP001160.3-201ENST00000601484 763 ntBASIC18.52■□□□□ 0.56
HMGA2P52926 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 AC098818.2-201ENST00000564925 2320 ntBASIC18.52■□□□□ 0.56
HMGA2P52926 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGA2P52926 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGA2P52926 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGA2P52926 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGA2P52926 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGA2P52926 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.52■□□□□ 0.55
HMGA2P52926 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMGA2P52926 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
HMGA2P52926 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGA2P52926 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HMGA2P52926 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMGA2P52926 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGA2P52926 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HMGA2P52926 TREX1-205ENST00000625293 1783 ntBASIC18.51■□□□□ 0.55
HMGA2P52926 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGA2P52926 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms