Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 CNN2P6-201ENST00000439038 900 ntBASIC18.84■□□□□ 0.61
RNF144AP50876 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF144AP50876 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF144AP50876 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF144AP50876 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF144AP50876 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF144AP50876 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF144AP50876 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF144AP50876 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
RNF144AP50876 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RNF144AP50876 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 KRT18P11-201ENST00000435214 1283 ntBASIC18.83■□□□□ 0.6
RNF144AP50876 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF144AP50876 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RNF144AP50876 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF144AP50876 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF144AP50876 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF144AP50876 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF144AP50876 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RNF144AP50876 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF144AP50876 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF144AP50876 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF144AP50876 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF144AP50876 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF144AP50876 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF144AP50876 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.82■□□□□ 0.6
RNF144AP50876 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF144AP50876 AL512408.1-201ENST00000569378 2000 ntBASIC18.82■□□□□ 0.6
RNF144AP50876 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 AC020907.5-201ENST00000624372 1936 ntBASIC18.82■□□□□ 0.6
RNF144AP50876 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF144AP50876 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF144AP50876 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF144AP50876 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF144AP50876 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RNF144AP50876 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF144AP50876 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF144AP50876 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF144AP50876 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF144AP50876 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF144AP50876 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF144AP50876 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF144AP50876 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF144AP50876 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF144AP50876 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF144AP50876 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF144AP50876 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms