Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCP4P48539 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.13□□□□□ -0.15
PCP4P48539 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.12□□□□□ -0.15
PCP4P48539 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 AC068880.1-201ENST00000507289 2297 ntBASIC14.12□□□□□ -0.15
PCP4P48539 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.12□□□□□ -0.15
PCP4P48539 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.12□□□□□ -0.15
PCP4P48539 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.12□□□□□ -0.15
PCP4P48539 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCP4P48539 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 AC010542.4-201ENST00000563151 1910 ntBASIC14.11□□□□□ -0.15
PCP4P48539 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCP4P48539 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.11□□□□□ -0.15
PCP4P48539 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PCP4P48539 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.1□□□□□ -0.15
PCP4P48539 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCP4P48539 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCP4P48539 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PCP4P48539 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PCP4P48539 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms