Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.1■□□□□ 0.97
MMP13P45452 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MMP13P45452 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
MMP13P45452 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 TERF1P5-201ENST00000477545 1207 ntBASIC21.1■□□□□ 0.97
MMP13P45452 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.1■□□□□ 0.97
MMP13P45452 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
MMP13P45452 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
MMP13P45452 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.1■□□□□ 0.97
MMP13P45452 AL162377.1-201ENST00000618844 1793 ntBASIC21.1■□□□□ 0.97
MMP13P45452 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP13P45452 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP13P45452 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP13P45452 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP13P45452 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.09■□□□□ 0.97
MMP13P45452 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.09■□□□□ 0.97
MMP13P45452 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.09■□□□□ 0.97
MMP13P45452 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.09■□□□□ 0.97
MMP13P45452 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.09■□□□□ 0.97
MMP13P45452 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MMP13P45452 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.09■□□□□ 0.97
MMP13P45452 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
MMP13P45452 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP13P45452 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP13P45452 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
MMP13P45452 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP13P45452 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.08■□□□□ 0.97
MMP13P45452 AC004911.1-201ENST00000416316 871 ntBASIC21.08■□□□□ 0.97
MMP13P45452 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP13P45452 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.08■□□□□ 0.97
MMP13P45452 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP13P45452 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP13P45452 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
MMP13P45452 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
MMP13P45452 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MMP13P45452 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP13P45452 AC112907.3-201ENST00000577781 2400 ntBASIC21.07■□□□□ 0.96
MMP13P45452 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP13P45452 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP13P45452 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 AC087289.5-201ENST00000586076 3175 ntBASIC21.07■□□□□ 0.96
MMP13P45452 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP13P45452 AC091799.1-201ENST00000422823 811 ntBASIC21.07■□□□□ 0.96
MMP13P45452 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP13P45452 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 DUX4L16-201ENST00000555130 1264 ntBASIC21.07■□□□□ 0.96
MMP13P45452 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MMP13P45452 AC013268.1-206ENST00000638368 961 ntBASIC21.07■□□□□ 0.96
MMP13P45452 AC112229.1-201ENST00000639295 961 ntBASIC21.07■□□□□ 0.96
MMP13P45452 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP13P45452 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MMP13P45452 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MMP13P45452 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP13P45452 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP13P45452 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 AC007225.1-201ENST00000566331 1836 ntBASIC21.06■□□□□ 0.96
MMP13P45452 AL020996.1-203ENST00000536896 2307 ntBASIC21.06■□□□□ 0.96
MMP13P45452 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP13P45452 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP13P45452 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms