Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
KRT20P35900 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 PCDHAC2-203ENST00000615316 3011 ntBASIC19.24■□□□□ 0.67
KRT20P35900 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
KRT20P35900 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT20P35900 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
KRT20P35900 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
KRT20P35900 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT20P35900 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT20P35900 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT20P35900 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT20P35900 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT20P35900 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT20P35900 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT20P35900 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KRT20P35900 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT20P35900 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT20P35900 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT20P35900 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT20P35900 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT20P35900 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 BID-214ENST00000617586 542 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT20P35900 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT20P35900 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT20P35900 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT20P35900 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT20P35900 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.21■□□□□ 0.67
KRT20P35900 AC138932.1-201ENST00000534164 6830 ntBASIC19.21■□□□□ 0.67
KRT20P35900 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT20P35900 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT20P35900 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT20P35900 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT20P35900 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT20P35900 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT20P35900 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT20P35900 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT20P35900 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.2■□□□□ 0.66
KRT20P35900 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT20P35900 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 AC006015.1-201ENST00000429970 570 ntBASIC19.2■□□□□ 0.66
KRT20P35900 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.2■□□□□ 0.66
KRT20P35900 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.2■□□□□ 0.66
KRT20P35900 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.2■□□□□ 0.66
KRT20P35900 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT20P35900 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT20P35900 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms