Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCK1P35558 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCK1P35558 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.34■■□□□ 1.01
PCK1P35558 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCK1P35558 AC016769.1-201ENST00000409132 1010 ntBASIC21.34■■□□□ 1.01
PCK1P35558 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCK1P35558 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.34■■□□□ 1.01
PCK1P35558 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCK1P35558 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCK1P35558 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCK1P35558 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCK1P35558 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.34■■□□□ 1.01
PCK1P35558 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.34■■□□□ 1.01
PCK1P35558 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCK1P35558 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCK1P35558 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.33■■□□□ 1.01
PCK1P35558 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCK1P35558 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.33■■□□□ 1.01
PCK1P35558 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCK1P35558 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.33■■□□□ 1.01
PCK1P35558 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCK1P35558 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PCK1P35558 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.33■■□□□ 1
PCK1P35558 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PCK1P35558 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.32■■□□□ 1
PCK1P35558 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.32■■□□□ 1
PCK1P35558 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
PCK1P35558 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.32■■□□□ 1
PCK1P35558 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.32■■□□□ 1
PCK1P35558 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.32■■□□□ 1
PCK1P35558 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.32■■□□□ 1
PCK1P35558 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCK1P35558 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCK1P35558 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCK1P35558 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.31■■□□□ 1
PCK1P35558 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.31■■□□□ 1
PCK1P35558 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.31■■□□□ 1
PCK1P35558 DUX4L16-201ENST00000555130 1264 ntBASIC21.31■■□□□ 1
PCK1P35558 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCK1P35558 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCK1P35558 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.3■■□□□ 1
PCK1P35558 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.3■■□□□ 1
PCK1P35558 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCK1P35558 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCK1P35558 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCK1P35558 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.3■■□□□ 1
PCK1P35558 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.3■■□□□ 1
PCK1P35558 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.3■■□□□ 1
PCK1P35558 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.3■■□□□ 1
PCK1P35558 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCK1P35558 AC092720.2-201ENST00000602388 1665 ntBASIC21.3■■□□□ 1
PCK1P35558 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCK1P35558 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCK1P35558 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 KRT8P36-201ENST00000489121 1440 ntBASIC21.29■■□□□ 1
PCK1P35558 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
PCK1P35558 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCK1P35558 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCK1P35558 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCK1P35558 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.29■■□□□ 1
PCK1P35558 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.29■■□□□ 1
PCK1P35558 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.29■■□□□ 1
PCK1P35558 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 CNN2P6-201ENST00000439038 900 ntBASIC21.29■■□□□ 1
PCK1P35558 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.29■■□□□ 1
PCK1P35558 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.29■■□□□ 1
PCK1P35558 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.29■■□□□ 1
PCK1P35558 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 AC011767.1-201ENST00000617410 1153 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms