Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PSMB4P28070 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PSMB4P28070 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
PSMB4P28070 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.69■□□□□ 0.9
PSMB4P28070 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PSMB4P28070 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.69■□□□□ 0.9
PSMB4P28070 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PSMB4P28070 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PSMB4P28070 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.68■□□□□ 0.9
PSMB4P28070 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.68■□□□□ 0.9
PSMB4P28070 AL162412.1-201ENST00000567129 965 ntBASIC20.68■□□□□ 0.9
PSMB4P28070 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.68■□□□□ 0.9
PSMB4P28070 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.68■□□□□ 0.9
PSMB4P28070 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 BID-214ENST00000617586 542 ntTSL 5 BASIC20.68■□□□□ 0.9
PSMB4P28070 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.68■□□□□ 0.9
PSMB4P28070 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.68■□□□□ 0.9
PSMB4P28070 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PSMB4P28070 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB4P28070 CYP21A1P-202ENST00000354927 1481 ntBASIC20.68■□□□□ 0.9
PSMB4P28070 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB4P28070 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PSMB4P28070 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 AC022517.1-201ENST00000592429 346 ntBASIC20.67■□□□□ 0.9
PSMB4P28070 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.67■□□□□ 0.9
PSMB4P28070 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB4P28070 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PSMB4P28070 AC068338.2-201ENST00000563278 1430 ntBASIC20.67■□□□□ 0.9
PSMB4P28070 AC087633.2-202ENST00000565166 1439 ntBASIC20.67■□□□□ 0.9
PSMB4P28070 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.67■□□□□ 0.9
PSMB4P28070 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PSMB4P28070 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.67■□□□□ 0.9
PSMB4P28070 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
PSMB4P28070 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB4P28070 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.66■□□□□ 0.9
PSMB4P28070 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMB4P28070 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PSMB4P28070 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB4P28070 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB4P28070 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMB4P28070 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB4P28070 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB4P28070 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMB4P28070 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PSMB4P28070 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
PSMB4P28070 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PSMB4P28070 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMB4P28070 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PSMB4P28070 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PSMB4P28070 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PSMB4P28070 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms