Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.38■□□□□ 0.85
CCND1P24385 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCND1P24385 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.37■□□□□ 0.85
CCND1P24385 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.37■□□□□ 0.85
CCND1P24385 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCND1P24385 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.37■□□□□ 0.85
CCND1P24385 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.37■□□□□ 0.85
CCND1P24385 AC008175.2-201ENST00000612840 297 ntBASIC20.37■□□□□ 0.85
CCND1P24385 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.37■□□□□ 0.85
CCND1P24385 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCND1P24385 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCND1P24385 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.37■□□□□ 0.85
CCND1P24385 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCND1P24385 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 POU5F1P4-201ENST00000413175 1085 ntBASIC20.36■□□□□ 0.85
CCND1P24385 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.36■□□□□ 0.85
CCND1P24385 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.36■□□□□ 0.85
CCND1P24385 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCND1P24385 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCND1P24385 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCND1P24385 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CCND1P24385 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.35■□□□□ 0.85
CCND1P24385 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.35■□□□□ 0.85
CCND1P24385 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.35■□□□□ 0.85
CCND1P24385 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.35■□□□□ 0.85
CCND1P24385 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.35■□□□□ 0.85
CCND1P24385 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCND1P24385 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCND1P24385 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCND1P24385 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCND1P24385 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.34■□□□□ 0.85
CCND1P24385 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.34■□□□□ 0.85
CCND1P24385 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCND1P24385 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCND1P24385 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.34■□□□□ 0.85
CCND1P24385 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCND1P24385 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCND1P24385 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CCND1P24385 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L2-201ENST00000561772 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 RARRES2P6-201ENST00000567333 442 ntBASIC20.34■□□□□ 0.85
CCND1P24385 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L6-201ENST00000626483 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L1-201ENST00000627662 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L8-201ENST00000629013 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L3-201ENST00000630187 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L7-201ENST00000630678 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 DUX4L5-201ENST00000630834 1275 ntBASIC20.34■□□□□ 0.85
CCND1P24385 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms