Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFSF4P23510 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TNFSF4P23510 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF4P23510 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF4P23510 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF4P23510 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TNFSF4P23510 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF4P23510 GUSBP6-202ENST00000438529 1198 ntBASIC17.35■□□□□ 0.37
TNFSF4P23510 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF4P23510 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFSF4P23510 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TNFSF4P23510 AC092118.2-201ENST00000613495 667 ntBASIC17.35■□□□□ 0.37
TNFSF4P23510 AL356652.1-201ENST00000615962 565 ntBASIC17.35■□□□□ 0.37
TNFSF4P23510 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF4P23510 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFSF4P23510 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TNFSF4P23510 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 AC006128.1-201ENST00000624704 1661 ntBASIC17.35■□□□□ 0.37
TNFSF4P23510 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF4P23510 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF4P23510 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 AL355472.2-201ENST00000422958 438 ntBASIC17.34■□□□□ 0.37
TNFSF4P23510 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF4P23510 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF4P23510 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.34■□□□□ 0.37
TNFSF4P23510 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF4P23510 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF4P23510 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF4P23510 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFSF4P23510 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF4P23510 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF4P23510 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF4P23510 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TNFSF4P23510 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF4P23510 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.33■□□□□ 0.36
TNFSF4P23510 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
TNFSF4P23510 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.33■□□□□ 0.36
TNFSF4P23510 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.33■□□□□ 0.36
TNFSF4P23510 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.33■□□□□ 0.36
TNFSF4P23510 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.33■□□□□ 0.36
TNFSF4P23510 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
TNFSF4P23510 AC105020.6-201ENST00000621523 1217 ntBASIC17.33■□□□□ 0.36
TNFSF4P23510 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 HCG11-201ENST00000411553 5696 ntBASIC17.33■□□□□ 0.36
TNFSF4P23510 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 AC005229.4-201ENST00000610085 2198 ntBASIC17.33■□□□□ 0.36
TNFSF4P23510 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF4P23510 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TNFSF4P23510 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TNFSF4P23510 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TNFSF4P23510 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFSF4P23510 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TNFSF4P23510 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF4P23510 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.32■□□□□ 0.36
TNFSF4P23510 PLK5-205ENST00000642079 1969 ntBASIC17.32■□□□□ 0.36
TNFSF4P23510 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF4P23510 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF4P23510 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TNFSF4P23510 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TNFSF4P23510 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF4P23510 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.32■□□□□ 0.36
TNFSF4P23510 AC142086.2-201ENST00000569753 217 ntBASIC17.32■□□□□ 0.36
TNFSF4P23510 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.32■□□□□ 0.36
TNFSF4P23510 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TNFSF4P23510 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFSF4P23510 MIR2861-201ENST00000636310 90 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms