Protein–RNA interactions for Protein: P23179

SPO11, Meiosis-specific protein SPO11, yeast

Predictions only

Length 398 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	P23179	YPK1	YKL126W	2043 nt		2.74	□□□□□ -1.97
SPO11	P23179	NPR2	YEL062W	1848 nt		2.74	□□□□□ -1.97
SPO11	P23179	MNT3	YIL014W	1893 nt		2.73	□□□□□ -1.97
SPO11	P23179	YDR048C	YDR048C	315 nt		2.73	□□□□□ -1.97
SPO11	P23179	RPS18B	YML026C	441 nt		2.73	□□□□□ -1.97
SPO11	P23179	RPL32	YBL092W	393 nt		2.73	□□□□□ -1.97
SPO11	P23179	LCL1	YPL056C	306 nt		2.73	□□□□□ -1.97
SPO11	P23179	YPL182C	YPL182C	384 nt		2.73	□□□□□ -1.97
SPO11	P23179	Q0143	Q0143	153 nt		2.72	□□□□□ -1.97
SPO11	P23179	HTB2	YBL002W	396 nt		2.72	□□□□□ -1.97
SPO11	P23179	DBP6	YNR038W	1890 nt		2.72	□□□□□ -1.97
SPO11	P23179	FUS1	YCL027W	1539 nt		2.72	□□□□□ -1.97
SPO11	P23179	VPS41	YDR080W	2979 nt		2.71	□□□□□ -1.98
SPO11	P23179	YGR174W-A	YGR174W-A	87 nt		2.71	□□□□□ -1.98
SPO11	P23179	YIL102C	YIL102C	306 nt		2.71	□□□□□ -1.98
SPO11	P23179	CCW14	YLR390W-A	717 nt		2.71	□□□□□ -1.98
SPO11	P23179	VPS13	YLL040C	9435 nt		2.7	□□□□□ -1.98
SPO11	P23179	PDR3	YBL005W	2931 nt		2.7	□□□□□ -1.98
SPO11	P23179	snR79	snR79	84 nt		2.7	□□□□□ -1.98
SPO11	P23179	YER121W	YER121W	345 nt		2.7	□□□□□ -1.98
SPO11	P23179	YIL156W-B	YIL156W-B	222 nt		2.7	□□□□□ -1.98
SPO11	P23179	ESF2	YNR054C	951 nt		2.7	□□□□□ -1.98
SPO11	P23179	YOR008C-A	YOR008C-A	225 nt		2.7	□□□□□ -1.98
SPO11	P23179	AIM9	YER080W	1884 nt		2.7	□□□□□ -1.98
SPO11	P23179	BIT61	YJL058C	1632 nt		2.7	□□□□□ -1.98
SPO11	P23179	BRO1	YPL084W	2535 nt		2.7	□□□□□ -1.98
SPO11	P23179	HSK3	YKL138C-A	210 nt		2.69	□□□□□ -1.98
SPO11	P23179	YLR154C-H	YLR154C-H	132 nt		2.69	□□□□□ -1.98
SPO11	P23179	YLR156C-A	YLR156C-A	132 nt		2.69	□□□□□ -1.98
SPO11	P23179	YLR157C-C	YLR157C-C	132 nt		2.69	□□□□□ -1.98
SPO11	P23179	YLR159C-A	YLR159C-A	132 nt		2.69	□□□□□ -1.98
SPO11	P23179	YNL338W	YNL338W	159 nt		2.69	□□□□□ -1.98
SPO11	P23179	YOR302W	YOR302W	78 nt		2.69	□□□□□ -1.98
SPO11	P23179	COG8	YML071C	1824 nt		2.69	□□□□□ -1.98
SPO11	P23179	ECM5	YMR176W	4236 nt		2.69	□□□□□ -1.98
SPO11	P23179	TAF2	YCR042C	4224 nt		2.68	□□□□□ -1.98
SPO11	P23179	EMC6	YLL014W	327 nt		2.68	□□□□□ -1.98
SPO11	P23179	YPR146C	YPR146C	330 nt		2.68	□□□□□ -1.98
SPO11	P23179	SIN3	YOL004W	4611 nt		2.68	□□□□□ -1.98
SPO11	P23179	STE11	YLR362W	2154 nt		2.68	□□□□□ -1.98
SPO11	P23179	TOM1	YDR457W	9807 nt		2.68	□□□□□ -1.98
SPO11	P23179	SMC6	YLR383W	3345 nt		2.68	□□□□□ -1.98
SPO11	P23179	TFB1	YDR311W	1929 nt		2.68	□□□□□ -1.98
SPO11	P23179	PHO91	YNR013C	2685 nt		2.67	□□□□□ -1.98
SPO11	P23179	FKS3	YMR306W	5358 nt		2.67	□□□□□ -1.98
SPO11	P23179	DIA2	YOR080W	2199 nt		2.67	□□□□□ -1.98
SPO11	P23179	RPL40A	YIL148W	387 nt		2.67	□□□□□ -1.98
SPO11	P23179	YMR324C	YMR324C	243 nt		2.67	□□□□□ -1.98
SPO11	P23179	REV1	YOR346W	2958 nt		2.67	□□□□□ -1.98
SPO11	P23179	TRM7	YBR061C	933 nt		2.67	□□□□□ -1.98
SPO11	P23179	SGS1	YMR190C	4344 nt		2.67	□□□□□ -1.98
SPO11	P23179	SKT5	YBL061C	2091 nt		2.67	□□□□□ -1.98
SPO11	P23179	SVL3	YPL032C	2478 nt		2.66	□□□□□ -1.98
SPO11	P23179	YGL239C	YGL239C	315 nt		2.66	□□□□□ -1.98
SPO11	P23179	YIL032C	YIL032C	357 nt		2.66	□□□□□ -1.98
SPO11	P23179	YMR172C-A	YMR172C-A	384 nt		2.66	□□□□□ -1.98
SPO11	P23179	YOR170W	YOR170W	306 nt		2.66	□□□□□ -1.98
SPO11	P23179	MSS11	YMR164C	2277 nt		2.66	□□□□□ -1.98
SPO11	P23179	FLO11	YIR019C	4104 nt		2.66	□□□□□ -1.98
SPO11	P23179	MSB1	YOR188W	3414 nt		2.65	□□□□□ -1.98
SPO11	P23179	TFC1	YBR123C	1950 nt		2.65	□□□□□ -1.98
SPO11	P23179	INO80	YGL150C	4470 nt		2.65	□□□□□ -1.98
SPO11	P23179	MDM20	YOL076W	2391 nt		2.65	□□□□□ -1.98
SPO11	P23179	RPS17B	YDR447C	411 nt		2.65	□□□□□ -1.99
SPO11	P23179	MET5	YJR137C	4329 nt		2.65	□□□□□ -1.99
SPO11	P23179	FRE2	YKL220C	2136 nt		2.65	□□□□□ -1.99
SPO11	P23179	SSE1	YPL106C	2082 nt		2.64	□□□□□ -1.99
SPO11	P23179	SOK2	YMR016C	2358 nt		2.64	□□□□□ -1.99
SPO11	P23179	NFT1	YKR103W	3657 nt		2.64	□□□□□ -1.99
SPO11	P23179	SIP3	YNL257C	3690 nt		2.64	□□□□□ -1.99
SPO11	P23179	YDL185C-A	YDL185C-A	228 nt		2.64	□□□□□ -1.99
SPO11	P23179	YMR31	YFR049W	372 nt		2.64	□□□□□ -1.99
SPO11	P23179	TIM13	YGR181W	318 nt		2.64	□□□□□ -1.99
SPO11	P23179	YLR154W-E	YLR154W-E	204 nt		2.64	□□□□□ -1.99
SPO11	P23179	RPL36A	YMR194W	303 nt		2.64	□□□□□ -1.99
SPO11	P23179	YNL170W	YNL170W	396 nt		2.64	□□□□□ -1.99
SPO11	P23179	YBR121C-A	YBR121C-A	159 nt		2.64	□□□□□ -1.99
SPO11	P23179	EXO84	YBR102C	2262 nt		2.64	□□□□□ -1.99
SPO11	P23179	JSN1	YJR091C	3276 nt		2.64	□□□□□ -1.99
SPO11	P23179	MVP1	YMR004W	1536 nt		2.63	□□□□□ -1.99
SPO11	P23179	NPR1	YNL183C	2373 nt		2.63	□□□□□ -1.99
SPO11	P23179	PRE4	YFR050C	801 nt		2.63	□□□□□ -1.99
SPO11	P23179	GPG1	YGL121C	381 nt		2.63	□□□□□ -1.99
SPO11	P23179	YJL150W	YJL150W	303 nt		2.63	□□□□□ -1.99
SPO11	P23179	YDR034C-D	YDR034C-D	5313 nt		2.63	□□□□□ -1.99
SPO11	P23179	MLH1	YMR167W	2310 nt		2.63	□□□□□ -1.99
SPO11	P23179	RSN1	YMR266W	2862 nt		2.63	□□□□□ -1.99
SPO11	P23179	APC2	YLR127C	2562 nt		2.62	□□□□□ -1.99
SPO11	P23179	DIS3	YOL021C	3006 nt		2.62	□□□□□ -1.99
SPO11	P23179	YIL166C	YIL166C	1629 nt		2.62	□□□□□ -1.99
SPO11	P23179	YHL042W	YHL042W	453 nt		2.62	□□□□□ -1.99
SPO11	P23179	YPR203W	YPR203W	309 nt		2.62	□□□□□ -1.99
SPO11	P23179	ECM25	YJL201W	1800 nt		2.62	□□□□□ -1.99
SPO11	P23179	TRS65	YGR166W	1683 nt		2.62	□□□□□ -1.99
SPO11	P23179	VTC3	YPL019C	2508 nt		2.62	□□□□□ -1.99
SPO11	P23179	COG3	YER157W	2406 nt		2.61	□□□□□ -1.99
SPO11	P23179	snR55	snR55	98 nt		2.61	□□□□□ -1.99
SPO11	P23179	QCR7	YDR529C	384 nt		2.61	□□□□□ -1.99
SPO11	P23179	YER088C-A	YER088C-A	324 nt		2.61	□□□□□ -1.99
SPO11	P23179	SAR1	YPL218W	573 nt		2.61	□□□□□ -1.99

Retrieved 100 of 7,029 protein–RNA pairs in 78.8 ms