Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 TCF3P1-201ENST00000423021 1937 ntBASIC18.65■□□□□ 0.58
RPS4Y1P22090 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4Y1P22090 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPS4Y1P22090 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RPS4Y1P22090 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 DPP3P2-201ENST00000416030 1696 ntBASIC18.64■□□□□ 0.57
RPS4Y1P22090 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 BID-214ENST00000617586 542 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS4Y1P22090 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 AL391422.3-201ENST00000603791 2761 ntBASIC18.64■□□□□ 0.57
RPS4Y1P22090 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4Y1P22090 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 CYP2T1P-201ENST00000432607 1285 ntBASIC18.63■□□□□ 0.57
RPS4Y1P22090 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS4Y1P22090 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y1P22090 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 MCRIP2P1-201ENST00000394346 511 ntBASIC18.62■□□□□ 0.57
RPS4Y1P22090 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 AC231657.2-201ENST00000624556 255 ntBASIC18.62■□□□□ 0.57
RPS4Y1P22090 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 AC112907.3-201ENST00000577781 2400 ntBASIC18.62■□□□□ 0.57
RPS4Y1P22090 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPS4Y1P22090 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y1P22090 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms