Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
NFKB1P19838 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.69■□□□□ 0.9
NFKB1P19838 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.68■□□□□ 0.9
NFKB1P19838 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NFKB1P19838 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.68■□□□□ 0.9
NFKB1P19838 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.68■□□□□ 0.9
NFKB1P19838 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.68■□□□□ 0.9
NFKB1P19838 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.68■□□□□ 0.9
NFKB1P19838 AC080038.1-201ENST00000611274 1154 ntBASIC20.68■□□□□ 0.9
NFKB1P19838 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.68■□□□□ 0.9
NFKB1P19838 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
NFKB1P19838 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NFKB1P19838 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NFKB1P19838 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 AL162377.1-201ENST00000618844 1793 ntBASIC20.67■□□□□ 0.9
NFKB1P19838 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
NFKB1P19838 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.67■□□□□ 0.9
NFKB1P19838 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 AL137784.2-201ENST00000607332 1000 ntBASIC20.67■□□□□ 0.9
NFKB1P19838 AL356652.1-201ENST00000615962 565 ntBASIC20.67■□□□□ 0.9
NFKB1P19838 AC073111.5-205ENST00000641717 521 ntBASIC20.67■□□□□ 0.9
NFKB1P19838 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 AL391422.3-201ENST00000603791 2761 ntBASIC20.67■□□□□ 0.9
NFKB1P19838 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.67■□□□□ 0.9
NFKB1P19838 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NFKB1P19838 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
NFKB1P19838 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
NFKB1P19838 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NFKB1P19838 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKB1P19838 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.66■□□□□ 0.9
NFKB1P19838 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.66■□□□□ 0.9
NFKB1P19838 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKB1P19838 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKB1P19838 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.66■□□□□ 0.9
NFKB1P19838 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NFKB1P19838 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NFKB1P19838 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
NFKB1P19838 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKB1P19838 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NFKB1P19838 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NFKB1P19838 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKB1P19838 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NFKB1P19838 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.65■□□□□ 0.9
NFKB1P19838 PGM5P4-201ENST00000421970 445 ntBASIC20.65■□□□□ 0.9
NFKB1P19838 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NFKB1P19838 AC069236.1-201ENST00000604339 616 ntBASIC20.65■□□□□ 0.9
NFKB1P19838 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.65■□□□□ 0.9
NFKB1P19838 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.65■□□□□ 0.9
NFKB1P19838 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.65■□□□□ 0.9
NFKB1P19838 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NFKB1P19838 SMG8-203ENST00000578922 2178 ntBASIC20.65■□□□□ 0.9
NFKB1P19838 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKB1P19838 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NFKB1P19838 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NFKB1P19838 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NFKB1P19838 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
NFKB1P19838 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NFKB1P19838 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.64■□□□□ 0.9
NFKB1P19838 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NFKB1P19838 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NFKB1P19838 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NFKB1P19838 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKB1P19838 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKB1P19838 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKB1P19838 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
NFKB1P19838 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.64■□□□□ 0.89
NFKB1P19838 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKB1P19838 AC005181.1-201ENST00000604782 1256 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms