Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
H2AFXP16104 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 AL390961.4-201ENST00000623958 2535 ntBASIC21.15■□□□□ 0.98
H2AFXP16104 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 AC009113.1-201ENST00000570267 2443 ntBASIC21.15■□□□□ 0.98
H2AFXP16104 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.15■□□□□ 0.98
H2AFXP16104 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
H2AFXP16104 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.15■□□□□ 0.98
H2AFXP16104 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
H2AFXP16104 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
H2AFXP16104 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
H2AFXP16104 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
H2AFXP16104 pRNA.6-201ENST00000610482 90 ntBASIC21.14■□□□□ 0.97
H2AFXP16104 pRNA.5-201ENST00000612139 90 ntBASIC21.14■□□□□ 0.97
H2AFXP16104 BHLHE23-202ENST00000612929 1109 ntBASIC21.14■□□□□ 0.97
H2AFXP16104 pRNA.11-201ENST00000618423 90 ntBASIC21.14■□□□□ 0.97
H2AFXP16104 pRNA.13-201ENST00000619112 90 ntBASIC21.14■□□□□ 0.97
H2AFXP16104 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
H2AFXP16104 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.14■□□□□ 0.97
H2AFXP16104 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
H2AFXP16104 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2AFXP16104 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2AFXP16104 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.14■□□□□ 0.97
H2AFXP16104 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2AFXP16104 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.14■□□□□ 0.97
H2AFXP16104 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
H2AFXP16104 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
H2AFXP16104 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2AFXP16104 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.14■□□□□ 0.97
H2AFXP16104 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.13■□□□□ 0.97
H2AFXP16104 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
H2AFXP16104 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.13■□□□□ 0.97
H2AFXP16104 AC104581.1-202ENST00000635932 2618 ntBASIC21.13■□□□□ 0.97
H2AFXP16104 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.13■□□□□ 0.97
H2AFXP16104 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.13■□□□□ 0.97
H2AFXP16104 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
H2AFXP16104 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.13■□□□□ 0.97
H2AFXP16104 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2AFXP16104 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.13■□□□□ 0.97
H2AFXP16104 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
H2AFXP16104 AL133373.2-201ENST00000623187 2828 ntBASIC21.12■□□□□ 0.97
H2AFXP16104 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.12■□□□□ 0.97
H2AFXP16104 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
H2AFXP16104 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 AC241377.3-202ENST00000626088 1088 ntBASIC21.12■□□□□ 0.97
H2AFXP16104 AC241585.3-202ENST00000628937 1088 ntBASIC21.12■□□□□ 0.97
H2AFXP16104 AC245100.8-202ENST00000629247 1058 ntBASIC21.12■□□□□ 0.97
H2AFXP16104 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
H2AFXP16104 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.12■□□□□ 0.97
H2AFXP16104 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
H2AFXP16104 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.12■□□□□ 0.97
H2AFXP16104 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.12■□□□□ 0.97
H2AFXP16104 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.12■□□□□ 0.97
H2AFXP16104 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.12■□□□□ 0.97
H2AFXP16104 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.12■□□□□ 0.97
H2AFXP16104 AC135050.7-201ENST00000624508 2218 ntBASIC21.12■□□□□ 0.97
H2AFXP16104 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2AFXP16104 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2AFXP16104 AC021242.3-201ENST00000607598 1377 ntBASIC21.11■□□□□ 0.97
H2AFXP16104 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
H2AFXP16104 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H2AFXP16104 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2AFXP16104 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2AFXP16104 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2AFXP16104 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2AFXP16104 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.11■□□□□ 0.97
H2AFXP16104 MIR4449-201ENST00000578365 66 ntBASIC21.11■□□□□ 0.97
H2AFXP16104 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.11■□□□□ 0.97
H2AFXP16104 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.11■□□□□ 0.97
H2AFXP16104 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
H2AFXP16104 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
H2AFXP16104 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
H2AFXP16104 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.1■□□□□ 0.97
H2AFXP16104 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.1■□□□□ 0.97
H2AFXP16104 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms