Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HOXB3P14651 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXB3P14651 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HOXB3P14651 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.9■□□□□ 0.78
HOXB3P14651 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXB3P14651 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXB3P14651 C1QBPP2-201ENST00000528754 825 ntBASIC19.9■□□□□ 0.78
HOXB3P14651 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXB3P14651 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXB3P14651 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXB3P14651 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXB3P14651 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXB3P14651 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXB3P14651 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXB3P14651 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 AL049796.1-201ENST00000565336 1766 ntBASIC19.89■□□□□ 0.77
HOXB3P14651 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXB3P14651 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HOXB3P14651 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXB3P14651 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HOXB3P14651 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HOXB3P14651 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXB3P14651 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HOXB3P14651 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXB3P14651 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
HOXB3P14651 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HOXB3P14651 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
HOXB3P14651 KRT18P68-201ENST00000392293 1000 ntBASIC19.88■□□□□ 0.77
HOXB3P14651 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXB3P14651 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HOXB3P14651 AL049597.2-201ENST00000565575 961 ntBASIC19.88■□□□□ 0.77
HOXB3P14651 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HOXB3P14651 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.88■□□□□ 0.77
HOXB3P14651 AL589743.5-201ENST00000616611 1050 ntBASIC19.88■□□□□ 0.77
HOXB3P14651 AL590326.2-201ENST00000625139 305 ntBASIC19.88■□□□□ 0.77
HOXB3P14651 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXB3P14651 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXB3P14651 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXB3P14651 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXB3P14651 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXB3P14651 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXB3P14651 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXB3P14651 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXB3P14651 TSPY7P-201ENST00000431358 1114 ntBASIC19.87■□□□□ 0.77
HOXB3P14651 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXB3P14651 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXB3P14651 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXB3P14651 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXB3P14651 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXB3P14651 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXB3P14651 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
HOXB3P14651 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXB3P14651 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXB3P14651 CD177P1-201ENST00000606252 935 ntBASIC19.86■□□□□ 0.77
HOXB3P14651 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXB3P14651 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.86■□□□□ 0.77
HOXB3P14651 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXB3P14651 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
HOXB3P14651 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms