Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNB1P11230 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CHRNB1P11230 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNB1P11230 AL353708.3-201ENST00000610272 989 ntBASIC20.67■□□□□ 0.9
CHRNB1P11230 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRNB1P11230 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNB1P11230 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNB1P11230 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHRNB1P11230 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.66■□□□□ 0.9
CHRNB1P11230 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.66■□□□□ 0.9
CHRNB1P11230 AC026471.5-201ENST00000615068 467 ntBASIC20.66■□□□□ 0.9
CHRNB1P11230 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHRNB1P11230 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNB1P11230 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNB1P11230 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNB1P11230 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNB1P11230 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.65■□□□□ 0.9
CHRNB1P11230 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHRNB1P11230 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.65■□□□□ 0.9
CHRNB1P11230 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNB1P11230 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CHRNB1P11230 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.65■□□□□ 0.9
CHRNB1P11230 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNB1P11230 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHRNB1P11230 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNB1P11230 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNB1P11230 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.64■□□□□ 0.9
CHRNB1P11230 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNB1P11230 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNB1P11230 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CHRNB1P11230 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNB1P11230 C9orf163-202ENST00000624034 2573 ntBASIC20.64■□□□□ 0.9
CHRNB1P11230 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.64■□□□□ 0.9
CHRNB1P11230 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHRNB1P11230 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRNB1P11230 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRNB1P11230 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CHRNB1P11230 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNB1P11230 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRNB1P11230 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHRNB1P11230 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CHRNB1P11230 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNB1P11230 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNB1P11230 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNB1P11230 AP003071.4-201ENST00000562276 1284 ntBASIC20.63■□□□□ 0.89
CHRNB1P11230 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.63■□□□□ 0.89
CHRNB1P11230 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNB1P11230 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNB1P11230 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms