Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 VMA7YGR020C 357 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 MRPL50YNR022C 420 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 NUT1YGL151W 3399 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 PHO92YDR374C 921 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 YLL020CYLL020C 306 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 IRC19YLL033W 693 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 YPL135C-AYPL135C-A 174 nt0.17□□□□□ -2.38
TY2B-LR1P0C2J3 YDL157CYDL157C 357 nt0.16□□□□□ -2.38
TY2B-LR1P0C2J3 YMR099CYMR099C 894 nt0.16□□□□□ -2.38
TY2B-LR1P0C2J3 RPB5YBR154C 648 nt0.16□□□□□ -2.38
TY2B-LR1P0C2J3 RPS24BYIL069C 408 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 REX3YLR107W 1215 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 GMC2YLR445W 567 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 SPC2YML055W 537 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 IES4YOR189W 351 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 YPR014CYPR014C 330 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 SGO1YOR073W 1773 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 HDA3YPR179C 1968 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 UTP10YJL109C 5310 nt0.15□□□□□ -2.39
TY2B-LR1P0C2J3 KEG1YFR042W 603 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 BET5YML077W 480 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 YNL226WYNL226W 411 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 PFK27YOL136C 1194 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 YGL109WYGL109W 324 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 YIL030W-AYIL030W-A 339 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 MGR1YCL044C 1254 nt0.14□□□□□ -2.39
TY2B-LR1P0C2J3 AHC2YCR082W 387 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 YER147C-AYER147C-A 411 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 FAR7YFR008W 666 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 ULI1YFR026C 510 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 ALG5YPL227C 1005 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 DSE1YER124C 1722 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 DAS1YJL149W 1992 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 PSO2YMR137C 1986 nt0.13□□□□□ -2.39
TY2B-LR1P0C2J3 YBL077WYBL077W 432 nt0.12□□□□□ -2.39
TY2B-LR1P0C2J3 GLG1YKR058W 1851 nt0.12□□□□□ -2.39
TY2B-LR1P0C2J3 FYV4YHR059W 393 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 NBP1YLR457C 960 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 SRB4YER022W 2064 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 DUO1YGL061C 744 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 EMC5YIL027C 426 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 YIR020CYIR020C 303 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 ABF2YMR072W 552 nt0.11□□□□□ -2.39
TY2B-LR1P0C2J3 GDS1YOR355W 1569 nt0.1□□□□□ -2.39
TY2B-LR1P0C2J3 MSC6YOR354C 2079 nt0.1□□□□□ -2.39
TY2B-LR1P0C2J3 TSA2YDR453C 591 nt0.1□□□□□ -2.39
TY2B-LR1P0C2J3 YFL012W-AYFL012W-A 375 nt0.1□□□□□ -2.39
TY2B-LR1P0C2J3 YFR054CYFR054C 579 nt0.1□□□□□ -2.39
TY2B-LR1P0C2J3 UPF3YGR072W 1164 nt0.1□□□□□ -2.39
TY2B-LR1P0C2J3 RTR1YER139C 681 nt0.09□□□□□ -2.39
TY2B-LR1P0C2J3 RSM27YGR215W 333 nt0.09□□□□□ -2.39
TY2B-LR1P0C2J3 HAL9YOL089C 3093 nt0.09□□□□□ -2.39
TY2B-LR1P0C2J3 SDL1YIL167W 633 nt0.09□□□□□ -2.4
TY2B-LR1P0C2J3 YMR324CYMR324C 243 nt0.09□□□□□ -2.4
TY2B-LR1P0C2J3 YOL013W-AYOL013W-A 192 nt0.09□□□□□ -2.4
TY2B-LR1P0C2J3 YBL100W-BYBL100W-B 5313 nt0.09□□□□□ -2.4
TY2B-LR1P0C2J3 PXA2YKL188C 2562 nt0.09□□□□□ -2.4
TY2B-LR1P0C2J3 BFR1YOR198C 1413 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 NUP120YKL057C 3114 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 SMD1YGR074W 441 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 GIC1YHR061C 945 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 RPL40BYKR094C 387 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 RPS10AYOR293W 318 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 FIG1YBR040W 897 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 CIN2YPL241C 807 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 ENV11YGR071C 2583 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 YDL206WYDL206W 2289 nt0.08□□□□□ -2.4
TY2B-LR1P0C2J3 MXR1YER042W 555 nt0.07□□□□□ -2.4
TY2B-LR1P0C2J3 YOL050CYOL050C 321 nt0.07□□□□□ -2.4
TY2B-LR1P0C2J3 LOA1YPR139C 903 nt0.07□□□□□ -2.4
TY2B-LR1P0C2J3 SLX4YLR135W 2247 nt0.07□□□□□ -2.4
TY2B-LR1P0C2J3 snR68snR68 136 nt0.06□□□□□ -2.4
TY2B-LR1P0C2J3 TCA17YEL048C 459 nt0.06□□□□□ -2.4
TY2B-LR1P0C2J3 AFR1YDR085C 1863 nt0.06□□□□□ -2.4
TY2B-LR1P0C2J3 VIK1YPL253C 1944 nt0.06□□□□□ -2.4
TY2B-LR1P0C2J3 NOP10YHR072W-A 177 nt0.05□□□□□ -2.4
TY2B-LR1P0C2J3 ARL3YPL051W 597 nt0.05□□□□□ -2.4
TY2B-LR1P0C2J3 YHL002C-AYHL002C-A 489 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 LAG1YHL003C 1236 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 RPI1YIL119C 1224 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 RAM2YKL019W 951 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 NIP100YPL174C 2607 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 RPL32YBL092W 393 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 YOL085W-AYOL085W-A 213 nt0.04□□□□□ -2.4
TY2B-LR1P0C2J3 SEC5YDR166C 2916 nt0.03□□□□□ -2.4
TY2B-LR1P0C2J3 YDR381C-AYDR381C-A 345 nt0.03□□□□□ -2.4
TY2B-LR1P0C2J3 MLP1YKR095W 5628 nt0.03□□□□□ -2.41
TY2B-LR1P0C2J3 TIF11YMR260C 462 nt0.02□□□□□ -2.41
TY2B-LR1P0C2J3 snR35snR35 204 nt0.02□□□□□ -2.41
TY2B-LR1P0C2J3 YBR200W-AYBR200W-A 165 nt0.02□□□□□ -2.41
TY2B-LR1P0C2J3 YGL217CYGL217C 342 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 BMT5YIL096C 1011 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 POP8YBL018C 402 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 RAD10YML095C 633 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 VPS74YDR372C 1038 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 RSM28YDR494W 1086 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 FMP23YBR047W 528 nt0.01□□□□□ -2.41
TY2B-LR1P0C2J3 SPT21YMR179W 2277 nt0□□□□□ -2.41
TY2B-LR1P0C2J3 YDL196WYDL196W 330 nt0□□□□□ -2.41
TY2B-LR1P0C2J3 YBR076C-AYBR076C-A 267 nt0□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms