Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2ABP04908 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 UBE2DNL-204ENST00000602536 740 ntBASIC18.46■□□□□ 0.55
HIST1H2ABP04908 MIR6821-201ENST00000617625 74 ntBASIC18.46■□□□□ 0.55
HIST1H2ABP04908 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 AC092720.2-201ENST00000602388 1665 ntBASIC18.46■□□□□ 0.55
HIST1H2ABP04908 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2ABP04908 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HIST1H2ABP04908 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HIST1H2ABP04908 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HIST1H2ABP04908 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 AC091799.1-201ENST00000422823 811 ntBASIC18.45■□□□□ 0.54
HIST1H2ABP04908 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 MYCNOS-205ENST00000641950 531 ntBASIC18.45■□□□□ 0.54
HIST1H2ABP04908 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2ABP04908 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 MIR2861-201ENST00000636310 90 ntBASIC18.44■□□□□ 0.54
HIST1H2ABP04908 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H2ABP04908 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms