Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CD74P04233 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.06■□□□□ 0.32
CD74P04233 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CD74P04233 RARRES2P1-201ENST00000474487 481 ntBASIC17.06■□□□□ 0.32
CD74P04233 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.06■□□□□ 0.32
CD74P04233 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.06■□□□□ 0.32
CD74P04233 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.06■□□□□ 0.32
CD74P04233 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD74P04233 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
CD74P04233 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.05■□□□□ 0.32
CD74P04233 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CD74P04233 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.05■□□□□ 0.32
CD74P04233 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.05■□□□□ 0.32
CD74P04233 Z82202.1-201ENST00000623446 1880 ntBASIC17.05■□□□□ 0.32
CD74P04233 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.05■□□□□ 0.32
CD74P04233 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD74P04233 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CD74P04233 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.04■□□□□ 0.32
CD74P04233 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 BX842568.3-201ENST00000418104 571 ntBASIC17.04■□□□□ 0.32
CD74P04233 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.04■□□□□ 0.32
CD74P04233 AC026471.1-201ENST00000564629 3026 ntBASIC17.04■□□□□ 0.32
CD74P04233 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD74P04233 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CD74P04233 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.03■□□□□ 0.32
CD74P04233 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CD74P04233 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.03■□□□□ 0.32
CD74P04233 RARRES2P11-201ENST00000635158 484 ntBASIC17.03■□□□□ 0.32
CD74P04233 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD74P04233 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
CD74P04233 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CD74P04233 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD74P04233 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms