Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.23■■□□□ 1.15
CHRNA1P02708 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.23■■□□□ 1.15
CHRNA1P02708 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHRNA1P02708 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CHRNA1P02708 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.23■■□□□ 1.15
CHRNA1P02708 AC211429.1-201ENST00000415277 523 ntBASIC22.23■■□□□ 1.15
CHRNA1P02708 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHRNA1P02708 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.23■■□□□ 1.15
CHRNA1P02708 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.23■■□□□ 1.15
CHRNA1P02708 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.23■■□□□ 1.15
CHRNA1P02708 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CHRNA1P02708 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.23■■□□□ 1.15
CHRNA1P02708 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRNA1P02708 KRT8P36-201ENST00000489121 1440 ntBASIC22.23■■□□□ 1.15
CHRNA1P02708 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.22■■□□□ 1.15
CHRNA1P02708 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.22■■□□□ 1.15
CHRNA1P02708 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CHRNA1P02708 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CHRNA1P02708 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CHRNA1P02708 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.22■■□□□ 1.15
CHRNA1P02708 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.22■■□□□ 1.15
CHRNA1P02708 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CHRNA1P02708 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.22■■□□□ 1.15
CHRNA1P02708 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRNA1P02708 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.22■■□□□ 1.15
CHRNA1P02708 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 AL117328.2-201ENST00000624617 1940 ntBASIC22.21■■□□□ 1.15
CHRNA1P02708 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.21■■□□□ 1.15
CHRNA1P02708 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.21■■□□□ 1.15
CHRNA1P02708 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CHRNA1P02708 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.21■■□□□ 1.15
CHRNA1P02708 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.21■■□□□ 1.15
CHRNA1P02708 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.21■■□□□ 1.15
CHRNA1P02708 MIR2861-201ENST00000636310 90 ntBASIC22.21■■□□□ 1.15
CHRNA1P02708 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CHRNA1P02708 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CHRNA1P02708 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHRNA1P02708 FBXW4P1-201ENST00000426721 2239 ntBASIC22.21■■□□□ 1.15
CHRNA1P02708 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CHRNA1P02708 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.2■■□□□ 1.14
CHRNA1P02708 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CHRNA1P02708 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.2■■□□□ 1.14
CHRNA1P02708 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CHRNA1P02708 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.2■■□□□ 1.14
CHRNA1P02708 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHRNA1P02708 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.2■■□□□ 1.14
CHRNA1P02708 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.19■■□□□ 1.14
CHRNA1P02708 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.19■■□□□ 1.14
CHRNA1P02708 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CHRNA1P02708 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 BX088651.1-201ENST00000540551 451 ntBASIC22.19■■□□□ 1.14
CHRNA1P02708 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.19■■□□□ 1.14
CHRNA1P02708 AC113410.3-201ENST00000623366 203 ntBASIC22.19■■□□□ 1.14
CHRNA1P02708 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.19■■□□□ 1.14
CHRNA1P02708 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.19■■□□□ 1.14
CHRNA1P02708 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CHRNA1P02708 AC012676.1-201ENST00000574705 1949 ntBASIC22.19■■□□□ 1.14
CHRNA1P02708 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRNA1P02708 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
CHRNA1P02708 EP400NL-214ENST00000641289 2402 ntBASIC22.18■■□□□ 1.14
CHRNA1P02708 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 AL135905.2-201ENST00000584934 1404 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms