Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRBC1P01850 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBC1P01850 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBC1P01850 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRBC1P01850 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRBC1P01850 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.37■□□□□ 0.85
TRBC1P01850 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.37■□□□□ 0.85
TRBC1P01850 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.37■□□□□ 0.85
TRBC1P01850 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRBC1P01850 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBC1P01850 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRBC1P01850 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBC1P01850 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRBC1P01850 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.36■□□□□ 0.85
TRBC1P01850 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
TRBC1P01850 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.36■□□□□ 0.85
TRBC1P01850 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.36■□□□□ 0.85
TRBC1P01850 AC097658.1-201ENST00000475555 843 ntBASIC20.36■□□□□ 0.85
TRBC1P01850 C2orf69P4-201ENST00000565394 541 ntBASIC20.36■□□□□ 0.85
TRBC1P01850 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBC1P01850 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBC1P01850 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBC1P01850 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBC1P01850 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBC1P01850 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.35■□□□□ 0.85
TRBC1P01850 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBC1P01850 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBC1P01850 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBC1P01850 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
TRBC1P01850 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TRBC1P01850 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRBC1P01850 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBC1P01850 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 AC083880.1-201ENST00000608266 535 ntBASIC20.34■□□□□ 0.85
TRBC1P01850 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBC1P01850 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TRBC1P01850 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.33■□□□□ 0.85
TRBC1P01850 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBC1P01850 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBC1P01850 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBC1P01850 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBC1P01850 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBC1P01850 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBC1P01850 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.33■□□□□ 0.85
TRBC1P01850 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.33■□□□□ 0.85
TRBC1P01850 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.33■□□□□ 0.85
TRBC1P01850 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBC1P01850 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBC1P01850 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRBC1P01850 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBC1P01850 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBC1P01850 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms